Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20horiana_20[genbank_20GCA_5F001624995.1_202016-04-20] 87 sequences; 66,403,143 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq23 93.3 4e-14 >seq23 Length=1203155 Score = 93.3 bits (102), Expect = 4e-14 Identities = 134/189 (71%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 131914 AACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTC 131973 |||||| || | | | ||||| ||||||||||||||||| | ||| || ||||| Sbjct 978468 AACCAAGTGAAGGGTGGACTCCTTTTGAATGTTGTAGTCCGCAAGGGTGCGGCCGTCTTC 978527 Query 131974 GAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGT 132033 || || ||||| | | |||| |||||||| || || ||||| |||||||| || || Sbjct 978528 AAGTTGCTTACCAGCAAAGATCAGACGCTGCTGGTCCGGAGGGATGCCTTCCTTGTCTTG 978587 Query 132034 AATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTT 132093 |||||| || | | || | || |||| | |||||| || | || | |||||| Sbjct 978588 AATTTTCGCCTTGACATTGTCAATGGTGTCGGAGGACTCCACCTCCAAAGTGATCGTTTT 978647 Query 132094 ACCAGTCAG 132102 |||||||| Sbjct 978648 GCCAGTCAG 978656 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476610681685320