Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20horiana_20[genbank_20GCA_5F001624995.1_202016-04-20] 87 sequences; 66,403,143 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq20 114 1e-20 >seq20 Length=1311088 Score = 114 bits (126), Expect = 1e-20 Identities = 275/413 (67%), Gaps = 10/413 (2%) Strand=Plus/Minus Query 19429 CCCAAAATTGTAAATGGTCCTGAAATCTTAAATAAATATGTAGGTCAATCGGAAGAAAAT 19488 ||||| || || ||||| || ||||| || ||||||| ||| || |||| || | || Sbjct 509747 CCCAAGATCGTTAATGGACCGGAAATTTTGAATAAATTTGTCGGAGAATCTGAGAAGAAC 509688 Query 19489 GTACGACGTTTGTTTGCTGACGCTGAAGAAGAACAAAAACGTTTAGGGCGCAAAAGTTCT 19548 | ||| ||||||| || || |||| ||| | || | |||| | | ||| Sbjct 509687 ATTCGAGAACTGTTTGCAGAGGCGGAAGTTGAATACAAG-GCCAAGGGTG-ATGAGTCAG 509630 Query 19549 T--TGCACATTATAATACTAGATGAATTGGACGCAATCTGTAAGCAAAGAGGTTCT---- 19602 | ||||| || || | || || ||||| ||||| ||||| || |||||||| Sbjct 509629 GACTACACATCATCATCTTCGACGAGTTGGATGCAATTTGTAAACAGAGAGGTTCGACCG 509570 Query 19603 --GGTGTAAATGGAGTACATGACACTGTTGTCAATCAACTCCTGTCAAAATTAGACGGTG 19660 |||| | ||| || || | || ||||||||||| |||||||| | ||||| | Sbjct 509569 GCGGTGGGACTGGTGTCGGCGATTCAGTCGTCAATCAACTGTTGTCAAAAATGGACGGAG 509510 Query 19661 TTAACCAACTGAATAATATTTTAGTTATTGGCATGACTAATAGACTGGAATTAATAGACA 19720 | | ||| |||| || |||||| | || || ||||| ||| || |||| | || || Sbjct 509509 TCGATCAATTGAACAACATTTTAATCATCGGAATGACCAATCGATTGGACATGATTGATG 509450 Query 19721 GCGCCTTATTACGACCCGGTCGGTTGGAAATAAAGATCGAAATTAACTTACCCGATGAAT 19780 || || | ||||| ||||| || ||| | | || || || ||||| ||||| Sbjct 509449 AAGCTCTACTCCGACCAGGTCGATTAGAAGTCCACATGGAGATCTCTTTACCGGATGAGA 509390 Query 19781 GTGGACGTGTGGAAATTTTAAACATACATACATCAACCATGCGACAAAATAAC 19833 ||| || | | ||||| ||||| |||||| | | ||| || |||||| Sbjct 509389 ATGGTCGACTACAGATTTTGAACATCCATACAGCCAAGATGAGAATGAATAAC 509337 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397455578572435