Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20horiana_20[genbank_20GCA_5F001624995.1_202016-04-20] 87 sequences; 66,403,143 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq23 87.8 2e-12 >seq23 Length=1203155 Score = 87.8 bits (96), Expect = 2e-12 Identities = 132/188 (70%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 39076 ACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCA 39135 ||||| || || ||| ||| ||||| || || || || ||||| || || |||| ||| Sbjct 978469 ACCAAGTGAAGGGTGGACTCCTTTTGAATGTTGTAGTCCGCAAGGGTGCGGCCGTCTTCA 978528 Query 39136 AGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATG 39195 || || || || ||||| || |||||||||||||| | || | || || ||||| Sbjct 978529 AGTTGCTTACCAGCAAAGATCAGACGCTGCTGGTCCGGAGGGATGCCTTCCTTGTCTTGA 978588 Query 39196 ATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTT 39255 |||||| |||| | | | || ||| |||||||| |||| ||||| |||| Sbjct 978589 ATTTTCGCCTTGACATTGTCAATGGTGTCGGAGGACTCCACCTCCAAAGTGATCGTTTTG 978648 Query 39256 CCCGTCAG 39263 || ||||| Sbjct 978649 CCAGTCAG 978656 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429545144547431