Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20horiana_20[genbank_20GCA_5F001624995.1_202016-04-20] 87 sequences; 66,403,143 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq22 91.5 2e-13 >seq22 Length=1232782 Score = 91.5 bits (100), Expect = 2e-13 Identities = 130/183 (71%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 77995 CTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGG 78054 ||| || |||||| ||| || |||||||||||||| || ||| ||| | || || | Sbjct 877570 CTTTCTCAACTCGAGACATGAATAGATCAGGTATCCAAAGCGCATAAAACAAGTCCCGAG 877629 Query 78055 TTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAAT 78114 || | |||||| || || |||||| | || || | | || | || ||| | || Sbjct 877630 CTCGACTTTCTTCCTTGCCGTGATTCTTCCTCAGGTCTAACCAGTCAAAAACATCCGCAT 877689 Query 78115 GCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATAT 78174 ||||||| || || || ||||| | | ||||||| ||| |||||||| ||||| | || Sbjct 877690 GCCATGGCTCAAGGTAGATTGCAAAGGCACCAGGTCTTTTGTTACCTCCTTGATCGACAT 877749 Query 78175 ATC 78177 ||| Sbjct 877750 ATC 877752 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694668044547680