Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20psidii_20[genbank_20GCA_5F001443065.1_202015-11-13] 57,309 sequences; 129,776,072 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq8935 109 5e-19 seq12608 100 3e-16 >seq8935 Length=3822 Score = 109 bits (120), Expect = 5e-19 Identities = 137/188 (73%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 23339 TTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCG 23398 || ||||| || ||||||||||| || || ||||| || ||||| || || || ||||| Sbjct 266 TTCTCAACCCGACTCATAAAAAGGTCAGGGATCCAAAGGGCGTAAAAGAGGTCACGGGCA 325 Query 23399 CGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGC 23458 || || |||||||| || ||| | | |||||| | || || || || |||||| Sbjct 326 CGATTTTCTTCTTTGCCATGATTTTTTCTTAGATCCAACCAATCAAAAACATCGGCATGC 385 Query 23459 CACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAA 23518 || || || | |||| ||||| || || |||||||| || || || ||||| ||||| Sbjct 386 CAAGGTTCTAAATAAATCGCAAAGGCACCGGGTCTCTTGTTTCCACCTTGATCAACGTAT 445 Query 23519 CGGGCCGT 23526 || || || Sbjct 446 CGAGCAGT 453 >seq12608 Length=2986 Score = 100 bits (110), Expect = 3e-16 Identities = 81/98 (83%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 22104 TCTTGTCCACTGTAAACTGTATGGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATGC 22163 ||||||| ||||||||||| ||||| || || || | | ||||||||||||||||| | Sbjct 1364 TCTTGTCAACTGTAAACTGAATGGCATTGGCAGCGGCTCGAGTGCGAAGATAATACATCC 1423 Query 22164 CCGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATC 22201 ||||||||||||| | ||||| |||||||| || ||| Sbjct 1424 CCGTCTTCAGACCTTTTTTCCAGGCGTAAAAGTGCATC 1461 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445447069667280