Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20psidii_20[genbank_20GCA_5F001443065.1_202015-11-13] 57,309 sequences; 129,776,072 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq2365 100 4e-17 >seq2365 Length=6765 Score = 100 bits (110), Expect = 4e-17 Identities = 95/119 (80%), Gaps = 2/119 (2%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || || || ||||| | ||||| | |||||||||||||||| || |||||||| || || Sbjct 5775 GCCAAACGCCATCGAAAGATCT-TAAGAGATAACATCCAAGGTATTACCAAGCCTGCGAT 5717 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550 || || |||||||||| ||||| ||||||||| | ||||| ||| | || ||||||| Sbjct 5716 TCGCCGATTGGCTCGTCGAGGTGGTGTCAAGCGTATTTCTGGTTTGATTTACGAAGAGA 5658 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79022801980137