Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20psidii_20[genbank_20GCA_5F001443065.1_202015-11-13] 57,309 sequences; 129,776,072 total letters Query= NC_006820.1 Length=196280 Score E Sequences producing significant alignments: (Bits) Value seq15031 253 3e-62 seq37735 152 6e-32 >seq15031 Length=1318 Score = 253 bits (280), Expect = 3e-62 Identities = 296/398 (74%), Gaps = 4/398 (1%) Strand=Plus/Plus Query 135515 CGCGAACCTGTTGCTGGTTCTCTAATGTACGGAAATAACATCATCTCTGGTGCTGTTATC 135574 || || |||||| |||| |||||| | || ||||| || || || |||||||| |||| Sbjct 923 CGTGAGCCTGTTTCTGGATCTCTACTTTATGGAAACAATATTATTTCTGGTGCCATTATT 982 Query 135575 CCTTCTAGCAACGCCATCGGCCTTCACTTCTATCCCATCTGGGAAGCTGCTTCTCTTGAT 135634 ||| || || || || | || || ||||| || |||||||| || || ||||| Sbjct 983 CCTACTTCTGCGGCTATAGGTTTGCATTTTTATCCTATATGGGAAGCGGCATCCGTTGAT 1042 Query 135635 GAGTGGCTATATAATGGTGGTCCTTATCAACTAGTGGTCTTCCACTTCCTTATCGGTGTC 135694 || ||| |||| ||||| ||||||||| ||||| | || | |||||| | | ||||| Sbjct 1043 GAATGGTTATACAATGGCGGTCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGTA 1102 Query 135695 TTCTCTTACATGGGTCGCGAGTGGGAACTCTCTTACCGACTGGGTATGCGCCCTTGGATT 135754 | || |||||||| ||||||||||| || || ||||||||||| ||||||||| Sbjct 1103 GCTTGCTATATGGGTCGTGAGTGGGAACTTAGTTTTCGTCTGGGTATGCGTCCTTGGATT 1162 Query 135755 TGTGTCGCTTACTCAGCCCCTGTTGCCGCTGCTACTGCTGTTTTCCTGGTCTACCCCTTT 135814 ||| || || ||||| |||||||| || || |||||||||||| || |||| || || Sbjct 1163 GCTGTTGCATATTCAGCTCCTGTTGCAGCGGCGACTGCTGTTTTCTTGATCTATCCTATT 1222 Query 135815 GGACAAGG--TTCTTTCAGTGATGGTATGCCGCTTGGCATTTCTGGAACTTTTAACTACA 135872 || || || ||||| ||||||||||| || || |||||||| ||||| || | | Sbjct 1223 GGTCAGGGAAGCTTTTCA--GATGGTATGCCTCTAGGAATTTCTGGTACTTTCAATTTTA 1280 Query 135873 TGCTTGTTTTCCAGGCAGAACACAACATTCTCATGCAT 135910 || |||| || ||||| || || || ||||| |||||| Sbjct 1281 TGATTGTATTTCAGGCTGAGCATAATATTCTTATGCAT 1318 >seq37735 Length=758 Score = 152 bits (168), Expect = 6e-32 Identities = 264/378 (70%), Gaps = 8/378 (2%) Strand=Plus/Minus Query 137943 GCTTATTTGGCCCTTGGTGGCTGGCTTACTGGCACAACGTTTGTTACAAGCTGGTACACC 138002 || ||||| ||| | || || ||| | || || ||||| ||||| || ||||| || Sbjct 375 GCCTATTTCGCCTTGGGGGGTTGGTTCACAGGTACAACCTTTGTAACTTCATGGTATACT 316 Query 138003 CACGGGTTGGCGTCTAGTTATCTTGAAGGCGCTAATTTCCTCACAGCAGCTGTTTCGACT 138062 || || ||||| | |||| | ||||| || ||| | || ||||| || || ||| Sbjct 315 CATGGATTGGCAAGTTCTTATTTGGAAGGATGCAACTTCTTAACCGCAGCAGTCTCCACT 256 Query 138063 CCTGCTGAT-GCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCTCAAGGAGA 138121 |||||| || ||| | | || ||| | | |||| ||||||||||| | || ||||| Sbjct 255 CCTGCTAATAGCT-TAGCACACTCTTTGTTGTTACTGTGGGGTCCTGAAGCACAGGGAGA 197 Query 138122 TATCGTCCGCTGGTTCCAACTTGGGGGACTCTGGACTTTTGTGGCGCTCCACGGGGCCTT 138181 | | ||| |||| ||| | || || || ||||||||||| || |||||||| || || Sbjct 196 TTTTACCCGTTGGTGTCAATTAGGTGGTCTGTGGACTTTTGTTGCTCTCCACGGTGCTTT 137 Query 138182 TAGTCTGATTGGATTCATGCTTCGCCAGTTTGAGATCTCTCG-TCTGGTAGGCA--TCCG 138238 | | || || |||||| | || || ||||| | |||| |||| | || | || Sbjct 136 CGGATTAATAGGTTTCATGTTACGTCAATTTGAACTTGCTCGATCTGTT---CAATTGCG 80 Query 138239 TCCCTACAACGCAATCGCATTCTCTGGTCCCATCGCTGTGTTCGTCAGCGTGTTCCTGAT 138298 || || || ||||| |||||||| ||||| || ||||| || || || ||||| || Sbjct 79 GCCTTATAATGCAATTGCATTCTCAGGTCCAATTGCTGTTTTTGTTTCTGTATTCCTTAT 20 Query 138299 GTATCCTTTGGGTCAATC 138316 ||||| ||||||| || Sbjct 19 TTATCCACTGGGTCAGTC 2 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627518147273600