Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20psidii_20[genbank_20GCA_5F001443065.1_202015-11-13] 57,309 sequences; 129,776,072 total letters Query= NC_008296.2 Length=177300 Score E Sequences producing significant alignments: (Bits) Value seq15031 190 2e-43 seq37735 145 9e-30 >seq15031 Length=1318 Score = 190 bits (210), Expect = 2e-43 Identities = 279/395 (71%), Gaps = 0/395 (0%) Strand=Plus/Plus Query 166195 CGTGAGCCCGTAGCAGGCTCTCTAATGTATGGTAACAACATCATCTCTGGTGCTGTTGTC 166254 |||||||| || | || |||||| | ||||| ||||| || || |||||||| || | Sbjct 923 CGTGAGCCTGTTTCTGGATCTCTACTTTATGGAAACAATATTATTTCTGGTGCCATTATT 982 Query 166255 CCCTCCTCCAACGCAATTGGTCTTCACTTCTATCCCATCTGGGAAGCAGCATCACTTGAT 166314 || | || || || ||| | || || ||||| || |||||||| ||||| ||||| Sbjct 983 CCTACTTCTGCGGCTATAGGTTTGCATTTTTATCCTATATGGGAAGCGGCATCCGTTGAT 1042 Query 166315 GAATGGCTTTATAACGGTGGTCCTTTCCAGCTCGTAGTCTTCCACTTCCTCATCGGCATC 166374 |||||| | || || || ||||||| | || | || | |||||| | | || | Sbjct 1043 GAATGGTTATACAATGGCGGTCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGTA 1102 Query 166375 TATGCCTACATGGGTCGTGAATGGGAATTGTCTTACCGCCTCGGTATGCGTCCTTGGATT 166434 | ||| ||||||||||| |||||| | || || || |||||||||||||||||| Sbjct 1103 GCTTGCTATATGGGTCGTGAGTGGGAACTTAGTTTTCGTCTGGGTATGCGTCCTTGGATT 1162 Query 166435 TGCGTAGCATACTCTGCACCTGTTGCAGCAGCATCCGCAGTCTTCCTGGTCTATCCTTTC 166494 || ||||| || || ||||||||||| || | || || ||| || |||||||| | Sbjct 1163 GCTGTTGCATATTCAGCTCCTGTTGCAGCGGCGACTGCTGTTTTCTTGATCTATCCTATT 1222 Query 166495 GGTCAAGGTTCTTTCTCTGACGCAATGCCCCTGGGTATCAGTGGCACCTTCAACTACATG 166554 ||||| || || || || | ||||| || || || ||| || ||||| | ||| Sbjct 1223 GGTCAGGGAAGCTTTTCAGATGGTATGCCTCTAGGAATTTCTGGTACTTTCAATTTTATG 1282 Query 166555 CTTGTCTTCCAAGCAGAGCACAACATCCTCATGCA 166589 |||| || || || ||||| || || || ||||| Sbjct 1283 ATTGTATTTCAGGCTGAGCATAATATTCTTATGCA 1317 >seq37735 Length=758 Score = 145 bits (160), Expect = 9e-30 Identities = 252/361 (70%), Gaps = 4/361 (1%) Strand=Plus/Minus Query 167393 GGTGGCTGGCTTACTGGCACGACGTTTGTTACGAGCTGGTATACCCACGGGTTGGCGTCT 167452 || || ||| | || || || || ||||| || |||||||| || || ||||| | Sbjct 360 GGGGGTTGGTTCACAGGTACAACCTTTGTAACTTCATGGTATACTCATGGATTGGCAAGT 301 Query 167453 AGTTACCTTGAGGG-TGCTAATTTTCTCACGGCAGCAGTGTCAACTCCTGCTGAC-GCTA 167510 ||| | || || ||| | || | | || |||||||| || ||||||||| | ||| Sbjct 300 TCTTATTTGGAAGGATGCAACTTCT-TAACCGCAGCAGTCTCCACTCCTGCTAATAGCT- 243 Query 167511 TGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCTCAGGGGGATTTCATCAGGTGGT 167570 | | || ||| | | |||| ||||||||||| | ||||| ||||| | | | |||| Sbjct 242 TAGCACACTCTTTGTTGTTACTGTGGGGTCCTGAAGCACAGGGAGATTTTACCCGTTGGT 183 Query 167571 GCCAGCTTGGGGGACTCTGGGCTTTTGTGGCGCTCCACGGAGCCTTTGCTCTCATAGGAT 167630 | || | || || || ||| ||||||| || |||||||| || || | | ||||| | Sbjct 182 GTCAATTAGGTGGTCTGTGGACTTTTGTTGCTCTCCACGGTGCTTTCGGATTAATAGGTT 123 Query 167631 TTATGCTTCGGCAATTTGAGATAAGTAGACTAGTAGGTATCCGTCCTTACAATGCGATTG 167690 | ||| | || |||||||| | | || || | || ||||| ||||| |||| Sbjct 122 TCATGTTACGTCAATTTGAACTTGCTCGATCTGTTCAATTGCGGCCTTATAATGCAATTG 63 Query 167691 CTTTTTCTGGTCCGATTGCTGTCTTTGTGTCTGTTTTTCTCATCTATCCTCTCGGACAGT 167750 | || || ||||| |||||||| ||||| ||||| || || || ||||| || || |||| Sbjct 62 CATTCTCAGGTCCAATTGCTGTTTTTGTTTCTGTATTCCTTATTTATCCACTGGGTCAGT 3 Query 167751 C 167751 | Sbjct 2 C 2 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 566825656266400