Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20psidii_20[genbank_20GCA_5F001443065.1_202015-11-13] 57,309 sequences; 129,776,072 total letters Query= NC_013085.1 Length=194454 Score E Sequences producing significant alignments: (Bits) Value seq15031 242 5e-59 seq37735 176 6e-39 >seq15031 Length=1318 Score = 242 bits (268), Expect = 5e-59 Identities = 294/397 (74%), Gaps = 4/397 (1%) Strand=Plus/Minus Query 7985 TGCATCAGGATGTTGTGCTCTGCTTGGAAGACAAGCATGTAGTTGAACGTACCAGAGATG 8044 ||||| || || || ||||| || || || |||| ||| | ||||| |||||||| || Sbjct 1317 TGCATAAGAATATTATGCTCAGCCTGAAATACAATCATAAAATTGAAAGTACCAGAAATT 1258 Query 8045 CCAAGAGGCATAGCGTCAGAGAAAGAACCTTGACCGAAAGGATAGACGAGGAATACAGCA 8104 || ||||||||| | || || || || ||||| | |||||||| | ||| |||||| Sbjct 1257 CCTAGAGGCATACCATCTGAAAAGCTTCCCTGACCAATAGGATAGATCAAGAAAACAGCA 1198 Query 8105 GATGCTGCAGCAACTGGAGCAGAGTATGCTACACAGATCCAGGGACGCATACCTAGACGG 8164 | || || ||||| ||||| || ||||| ||| ||||| ||||||||||| ||||| Sbjct 1197 GTCGCCGCTGCAACAGGAGCTGAATATGCAACAGCAATCCAAGGACGCATACCCAGACGA 1138 Query 8165 TAAGAAAGTTCCCACTCACGACCCATGTATGCATAG--ATACCGATCAGGAAGTGGAAGA 8222 || ||||||||||||||||||||| || ||| || | ||| | | |||||| | | Sbjct 1137 AAACTAAGTTCCCACTCACGACCCATATA-GCA-AGCTACACCAAGTAAGAAGTGTAGAA 1080 Query 8223 TAACGAGTTGGAAAGGACCACCGTTGTAGAGCCACTCATCAAGAGAAGCTGCTTCCCAGA 8282 || |||| ||||||| || ||||| | ||| ||||||| || || |||||||| | Sbjct 1079 CAATTAGTTCATAAGGACCGCCATTGTATAACCATTCATCAACGGATGCCGCTTCCCATA 1020 Query 8283 TGGGATAGAAGTGGAGACCAATAGCGTTAGAAGAAGGAACAACAGCACCAGAGATGATGT 8342 | ||||| || || | ||| ||||| ||||| ||||| || |||||||| || || | Sbjct 1019 TAGGATAAAAATGCAAACCTATAGCCGCAGAAGTAGGAATAATGGCACCAGAAATAATAT 960 Query 8343 TGTTGCCATACATGAGCGAACCAGCGACGGGTTCACG 8379 |||| ||||| | || || |||| || || ||||| Sbjct 959 TGTTTCCATAAAGTAGAGATCCAGAAACAGGCTCACG 923 >seq37735 Length=758 Score = 176 bits (194), Expect = 6e-39 Identities = 260/363 (72%), Gaps = 4/363 (1%) Strand=Plus/Plus Query 6824 GACTGTCCGAGAGGATACATGAGAAAGACAGACACAAAGACAGCAATGGGACCAGAAAAC 6883 ||||| || || ||||| || || || ||||| ||||| |||||||| ||||| || || Sbjct 2 GACTGACCCAGTGGATAAATAAGGAATACAGAAACAAAAACAGCAATTGGACCTGAGAAT 61 Query 6884 GCGATTGCATTGTAGGGACGAATACCGACTAGA-CGTGCGATCTCAAACTGCCGAAGCAT 6942 || |||||||| || || || | | || ||| || || | ||||| || || | ||| Sbjct 62 GCAATTGCATTATAAGGCCGCA-ATTGAACAGATCGAGCAAGTTCAAATTGACGTAACAT 120 Query 6943 GAAACCTATAAGGGCAAAGGCTCCGTGGAGCGCCACAAAAGGCCATAGTCCCCCAAGTTG 7002 ||||||||| | | || || |||||||| || ||||||| ||| || || || | ||| Sbjct 121 GAAACCTATTAATCCGAAAGCACCGTGGAGAGCAACAAAAGTCCACAGACCACCTAATTG 180 Query 7003 GAGCCAGCGGACGAAATCTCCCTGAGCTTCTGGACCCCATAGAAGAAGTAGGGAATGTCC 7062 ||| ||| ||||||||||| ||||| |||||||| || | | | || ||| | Sbjct 181 ACACCAACGGGTAAAATCTCCCTGTGCTTCAGGACCCCACAGTAACAACAAAGAGTGTGC 240 Query 7063 GAGAGC-GTCAGCAGGAGTTGATACAGCAGCAGTAAGGAAATTACATCCCTCAAGATACG 7121 | ||| | ||||||||| || || || || || | ||| || ||||| || | ||| | Sbjct 241 TA-AGCTATTAGCAGGAGTGGAGACTGCTGCGGTTAAGAAGTTGCATCCTTCCAAATAAG 299 Query 7122 AAGAAGCAATCCCGTGAGTGTACCAGCTCGTGACGAAAGTTGTGCCCGTGAGCCAACCGC 7181 || || | || ||||| ||||| || || || ||||| || |||| |||||| | Sbjct 300 AACTTGCCAATCCATGAGTATACCATGAAGTTACAAAGGTTGTACCTGTGAACCAACCCC 359 Query 7182 CCA 7184 ||| Sbjct 360 CCA 362 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 621679133122960