Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20psidii_20[genbank_20GCA_5F001443065.1_202015-11-13] 57,309 sequences; 129,776,072 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq1921 91.5 6e-13 >seq1921 Length=7076 Score = 91.5 bits (100), Expect = 6e-13 Identities = 177/260 (68%), Gaps = 6/260 (2%) Strand=Plus/Plus Query 451346 TTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTT 451405 ||||| || || || || || || || || ||||| || |||||| ||||| || || Sbjct 3363 TTCAACGACGCTCAGCGTCAGGCTACCAAGGATGCCGGTGTTATTGCCGGTTTGAACGTC 3422 Query 451406 CTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAA 451465 |||||||| | ||||| ||| | || || || | ||||| ||||| | ||| | || Sbjct 3423 CTTCGAATCGTCAATGAGCCTCCCGCTGCAGCAATTGCATACGGACTTGACAAAACTAAG 3482 Query 451466 GAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCT 451525 | ||| ||| |||| || | ||||| || || || ||| |||| ||| Sbjct 3483 GGT---GAACGTCAAATTATT---GTCTACGATTTGGGAGGTGGTACTTTTGATGTCTCT 3536 Query 451526 GTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTA 451585 | || || ||||| || || || |||||||| ||| || ||||| ||||| | Sbjct 3537 CTTCTCTCTATTGATGAGGGAGTCTTTGAAGTCTTGGCTACTGCCGGTGACACTCACTTG 3596 Query 451586 GGAGGTGAAGATATTGATAA 451605 ||||||||||| |||| || Sbjct 3597 GGAGGTGAAGACTTTGACAA 3616 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1974267686163372