Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20psidii_20[genbank_20GCA_5F001443065.1_202015-11-13] 57,309 sequences; 129,776,072 total letters Query= NC_015283.1 Length=176428 Score E Sequences producing significant alignments: (Bits) Value seq15031 199 4e-46 >seq15031 Length=1318 Score = 199 bits (220), Expect = 4e-46 Identities = 282/394 (72%), Gaps = 2/394 (1%) Strand=Plus/Plus Query 168635 GAACCTGTAGCAGGTGCTCTAATGTATGGAAACAACATCATCTCAGGTGCAGTTGTTCCA 168694 || ||||| | || ||||| | ||||||||||| || || || ||||| || |||| Sbjct 926 GAGCCTGTTTCTGGATCTCTACTTTATGGAAACAATATTATTTCTGGTGCCATTATTCCT 985 Query 168695 TCTTCAAACGCAATCGGTCTACACTTCTACCCAATTTGGGAAGCAGCTACAATCGATGAG 168754 |||| || || ||| | || || || || || |||||||| || | | ||||| Sbjct 986 ACTTCTGCGGCTATAGGTTTGCATTTTTATCCTATATGGGAAGCGGCATCCGTTGATGAA 1045 Query 168755 TGGTTATATAATGGTGGTCCTTACCAGTTGGTAATCTTCCACTTCCTAATCGGAATCTCT 168814 |||||||| ||||| |||||||| | | | | | |||||| || | || | || Sbjct 1046 TGGTTATACAATGGCGGTCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGTAGCT 1105 Query 168815 GCCTACATGGGTAGACAGTGGGAA-TTATCATACAGACTAGGTATGAGACCTTGGATCTG 168873 ||| |||||| | |||||||| ||| | | | || |||||| | |||||||| Sbjct 1106 TGCTATATGGGTCGTGAGTGGGAACTTAGTTTTC-GTCTGGGTATGCGTCCTTGGATTGC 1164 Query 168874 TGTTGCTTATTCAGCACCAGTATCTGCAGCATTTGCAGTATTCCTTGTATACCCATTTGG 168933 |||||| |||||||| || || | || || ||| || ||| | | || || |||| Sbjct 1165 TGTTGCATATTCAGCTCCTGTTGCAGCGGCGACTGCTGTTTTCTTGATCTATCCTATTGG 1224 Query 168934 TCAGGGTTCTTTCTCTGATGGTATGCCTCTAGGAATTTCTGGAACATTCAACTTCATGTT 168993 |||||| || || |||||||||||||||||||||||||| || ||||| || ||| | Sbjct 1225 TCAGGGAAGCTTTTCAGATGGTATGCCTCTAGGAATTTCTGGTACTTTCAATTTTATGAT 1284 Query 168994 CGTATTCCAAGCAGAGCACAACATTCTTATGCAT 169027 ||||| || || ||||| || |||||||||||| Sbjct 1285 TGTATTTCAGGCTGAGCATAATATTCTTATGCAT 1318 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 564037255204320