Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20psidii_20[genbank_20GCA_5F001443065.1_202015-11-13] 57,309 sequences; 129,776,072 total letters Query= NC_015285.1 Length=174285 Score E Sequences producing significant alignments: (Bits) Value seq15031 196 5e-45 seq37735 185 1e-41 >seq15031 Length=1318 Score = 196 bits (216), Expect = 5e-45 Identities = 283/397 (71%), Gaps = 2/397 (1%) Strand=Plus/Plus Query 162526 CGTGAACCCGTCGCTGGTTCACTCATGTATGGTAACAACATCATCTCTGGTGCAGTTGTT 162585 ||||| || || |||| || || | ||||| ||||| || || |||||||| || || Sbjct 923 CGTGAGCCTGTTTCTGGATCTCTACTTTATGGAAACAATATTATTTCTGGTGCCATTATT 982 Query 162586 CCATCTTCCAACGCAATTGGTCTTCACTTCTATCCCATCTGGGAAGCCGCATCACTTGAT 162645 || |||| || || ||| | || || ||||| || |||||||| ||||| ||||| Sbjct 983 CCTACTTCTGCGGCTATAGGTTTGCATTTTTATCCTATATGGGAAGCGGCATCCGTTGAT 1042 Query 162646 GAGTGGCTGTATAACGGTGGTCCTTTCCAACTCGTAGTATTCCACTTCCTGATCGGCATC 162705 || ||| | || || || ||||||| |||| | || | |||||| | | || | Sbjct 1043 GAATGGTTATACAATGGCGGTCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGTA 1102 Query 162706 TATGCCTACATGGGACGTGAATGGGAACTCTCTTACCGTCTTGGTATGCGTCCATGGATC 162765 | ||| ||||| ||||| |||||||| || ||||| ||||||||||| ||||| Sbjct 1103 GCTTGCTATATGGGTCGTGAGTGGGAACTTAGTTTTCGTCTGGGTATGCGTCCTTGGAT- 1161 Query 162766 TGC-GTAGCATACTCTGCACCTGTTGCAGCAGCATCGGCAGTCTTCCTGGTCTATCCTTT 162824 ||| || ||||| || || ||||||||||| || | || || ||| || |||||||| | Sbjct 1162 TGCTGTTGCATATTCAGCTCCTGTTGCAGCGGCGACTGCTGTTTTCTTGATCTATCCTAT 1221 Query 162825 CGGTCAAGGTTCTTTCTCTGACGCAATGCCCTTGGGTATCAGTGGTACATTCAACTACAT 162884 ||||| || || || || | ||||| | || || |||||| ||||| | || Sbjct 1222 TGGTCAGGGAAGCTTTTCAGATGGTATGCCTCTAGGAATTTCTGGTACTTTCAATTTTAT 1281 Query 162885 GCTTGTCTTCCAAGCAGAGCACAACATTCTGATGCAT 162921 | |||| || || || ||||| || ||||| |||||| Sbjct 1282 GATTGTATTTCAGGCTGAGCATAATATTCTTATGCAT 1318 >seq37735 Length=758 Score = 185 bits (204), Expect = 1e-41 Identities = 265/363 (73%), Gaps = 8/363 (2%) Strand=Plus/Minus Query 163714 GGTGGCTGGCTTACTGGTACAACTTTCGTTACGTCGTGGTACACCCATGGACTGGCAACT 163773 || || ||| | || |||||||| || || || || ||||| || |||||| |||||| | Sbjct 360 GGGGGTTGGTTCACAGGTACAACCTTTGTAACTTCATGGTATACTCATGGATTGGCAAGT 301 Query 163774 TCCTATCTTGAGGG-TGCTAATTTTCTCACAGCGGCTGTGTCAACGCCTGCTGAC-GCTA 163831 || ||| | || || ||| | || | | || || || || || || |||||| | ||| Sbjct 300 TCTTATTTGGAAGGATGCAACTTCT-TAACCGCAGCAGTCTCCACTCCTGCTAATAGCT- 243 Query 163832 TGGGTCATTCTCTTCTTCTT-CTCTGGGGTCCTGAGGCTCAGGGCGATTTCGTCCGCTGG 163890 | | || ||| || || || || ||||||||||| || ||||| ||||| ||| ||| Sbjct 242 TAGCACACTCT-TTGTTGTTACTGTGGGGTCCTGAAGCACAGGGAGATTTTACCCGTTGG 184 Query 163891 ATCCAACTTGGGGGACTCTGGAATTTTGTGGCACTCCACGGAGCCTTTGCTCTCATTGGT 163950 ||| | || || || |||| |||||| || |||||||| || || | | || ||| Sbjct 183 TGTCAATTAGGTGGTCTGTGGACTTTTGTTGCTCTCCACGGTGCTTTCGGATTAATAGGT 124 Query 163951 TTCATGCTTCGGCAATTTGAACTTGCTCG-CCTGATTGGAATCAGACCCTACAATGCGAT 164009 |||||| | || ||||||||||||||||| ||| || | | | || || ||||| || Sbjct 123 TTCATGTTACGTCAATTTGAACTTGCTCGATCTG-TTCAATTGCGGCCTTATAATGCAAT 65 Query 164010 TGCTTTCTCTGGTCCTATTGCTGTCTTCGTTAGTGTCTTTCTCATCTACCCTCTGGGTCA 164069 ||| ||||| ||||| |||||||| || ||| ||| || || || || || |||||||| Sbjct 64 TGCATTCTCAGGTCCAATTGCTGTTTTTGTTTCTGTATTCCTTATTTATCCACTGGGTCA 5 Query 164070 ATC 164072 || Sbjct 4 GTC 2 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 557184567731800