Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20psidii_20[genbank_20GCA_5F001443065.1_202015-11-13] 57,309 sequences; 129,776,072 total letters Query= NC_015287.1 Length=232878 Score E Sequences producing significant alignments: (Bits) Value seq15031 192 9e-44 >seq15031 Length=1318 Score = 192 bits (212), Expect = 9e-44 Identities = 282/394 (72%), Gaps = 4/394 (1%) Strand=Plus/Plus Query 215438 GAGCCAGTTGCTGGTTCTTTAATGTATGGTAACAACATCATCTCTGGTGCTGTTGTACCT 215497 ||||| ||| |||| ||| || | ||||| ||||| || || |||||||| || | ||| Sbjct 926 GAGCCTGTTTCTGGATCTCTACTTTATGGAAACAATATTATTTCTGGTGCCATTATTCCT 985 Query 215498 AGTTCAAACGCAATCGGATTACACTTCTACCCTATCTGGGAAGCAGCAACAGTTGACGAA 215557 | ||| || || || || || || || ||||| |||||||| ||| | ||||| ||| Sbjct 986 ACTTCTGCGGCTATAGGTTTGCATTTTTATCCTATATGGGAAGCGGCATCCGTTGATGAA 1045 Query 215558 TGGCTCTACAATGGTGGACCTTTCCAACTGGTTATCTTCCACTTCCTCATTGGTATTTCT 215617 ||| | |||||||| || |||| |||| || | | |||||| | ||||| | || Sbjct 1046 TGGTTATACAATGGCGGTCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGTAGCT 1105 Query 215618 -GC-ATACTGCGGAAGACAGTGGGAACTTTCTTACAGATTAGGTATGAGACCTTGGATCT 215675 || ||| || || | ||||||||||| || | | |||||| | |||||||| Sbjct 1106 TGCTATA-TG-GGTCGTGAGTGGGAACTTAGTTTTCGTCTGGGTATGCGTCCTTGGATTG 1163 Query 215676 GTGTTGCTTACTCCGCACCTGTATCTGCTGCCTTTGCAGTATTCCTTGTGTATCCATTCG 215735 |||||| || || || ||||| | || || ||| || ||| | | ||||| | | Sbjct 1164 CTGTTGCATATTCAGCTCCTGTTGCAGCGGCGACTGCTGTTTTCTTGATCTATCCTATTG 1223 Query 215736 GTCAGGGTTCTTTCTCTGATGCTATGCCACTTGGAATCTCTGGAACATTCAACTACATGT 215795 ||||||| || || |||| |||||| || ||||| ||||| || ||||| | ||| Sbjct 1224 GTCAGGGAAGCTTTTCAGATGGTATGCCTCTAGGAATTTCTGGTACTTTCAATTTTATGA 1283 Query 215796 TTGTTTTCCAGGCTGAGCACAACATTCTGATGCA 215829 |||| || ||||||||||| || ||||| ||||| Sbjct 1284 TTGTATTTCAGGCTGAGCATAATATTCTTATGCA 1317 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 744547851482320