Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20psidii_20[genbank_20GCA_5F001443065.1_202015-11-13] 57,309 sequences; 129,776,072 total letters Query= NC_015290.1 Length=182180 Score E Sequences producing significant alignments: (Bits) Value seq15031 223 4e-53 >seq15031 Length=1318 Score = 223 bits (246), Expect = 4e-53 Identities = 270/368 (73%), Gaps = 0/368 (0%) Strand=Plus/Plus Query 169858 TATGGTAACAACATCATCTCTGGTGCAGTTGTTCCATCTTCAAACGCAATCGGTCTCCAC 169917 ||||| ||||| || || |||||||| || |||| |||| || || ||| | || Sbjct 950 TATGGAAACAATATTATTTCTGGTGCCATTATTCCTACTTCTGCGGCTATAGGTTTGCAT 1009 Query 169918 TTCTATCCTATTTGGGAAGCAGCAACTCTAGATGAGTGGTTGTATAACGGTGGTCCTTAT 169977 || |||||||| |||||||| ||| | | ||||| ||||| || || || ||||||||| Sbjct 1010 TTTTATCCTATATGGGAAGCGGCATCCGTTGATGAATGGTTATACAATGGCGGTCCTTAT 1069 Query 169978 CAATTAGTTATCTTCCACTTCCTTATCGGAATCTCTGCCTACATGGGTAGACAGTGGGAA 170037 || || || | | |||||| | | || | || ||| |||||| | |||||||| Sbjct 1070 GAACTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGCTATATGGGTCGTGAGTGGGAA 1129 Query 170038 CTATCATACCGTTTAGGTATGCGTCCTTGGATCTGTGTAGCATATTCTGCTCCAGTGTCA 170097 || | ||| | ||||||||||||||||| ||| |||||||| ||||| || || Sbjct 1130 CTTAGTTTTCGTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCA 1189 Query 170098 GCAGCATTCGCTGTATTCTTAGTGTATCCTTTCGGTCAGGGATCTTTCTCAGACGGAATG 170157 || || ||||| ||||| | |||||| | ||||||||| || ||||| || ||| Sbjct 1190 GCGGCGACTGCTGTTTTCTTGATCTATCCTATTGGTCAGGGAAGCTTTTCAGATGGTATG 1249 Query 170158 CCTCTAGGTATCTCAGGTACATTTAACTTCATGTTCGTATTCCAAGCAGAGCACAACATT 170217 |||||||| || || ||||| || || || ||| | ||||| || || ||||| || ||| Sbjct 1250 CCTCTAGGAATTTCTGGTACTTTCAATTTTATGATTGTATTTCAGGCTGAGCATAATATT 1309 Query 170218 CTTATGCA 170225 |||||||| Sbjct 1310 CTTATGCA 1317 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 582430469549600