Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20psidii_20[genbank_20GCA_5F001443065.1_202015-11-13] 57,309 sequences; 129,776,072 total letters Query= NC_015569.1 Length=178563 Score E Sequences producing significant alignments: (Bits) Value seq15031 268 1e-66 >seq15031 Length=1318 Score = 268 bits (296), Expect = 1e-66 Identities = 299/397 (75%), Gaps = 2/397 (1%) Strand=Plus/Minus Query 84419 ATGCATAAGGATGTTATGTTCCGCCTGGAAGACAAGCATGTAGTTGAACGTTCCTGAGAT 84478 ||||||||| || ||||| || ||||| || |||| ||| | ||||| || || || || Sbjct 1318 ATGCATAAGAATATTATGCTCAGCCTGAAATACAATCATAAAATTGAAAGTACCAGAAAT 1259 Query 84479 ACCAAGTGGCATGCCATCAGAGAAAGAACCTTGCCCGAAAGGATACACAAGGAATACAGC 84538 || || ||||| ||||| || || || || || | |||||| | | ||| ||||| Sbjct 1258 TCCTAGAGGCATACCATCTGAAAAGCTTCCCTGACCAATAGGATAGATCAAGAAAACAGC 1199 Query 84539 AGATGCCGCTGCAACTGGAGCAGAGTAAGCAACACAGATCCATGGACGCATACCGAGACG 84598 || ||||||||||| ||||| || || |||||| ||||| ||||||||||| ||||| Sbjct 1198 AGTCGCCGCTGCAACAGGAGCTGAATATGCAACAGCAATCCAAGGACGCATACCCAGACG 1139 Query 84599 ATATGAAAGTTCCCATTCACGACCCATGTAAGCAAA-TGCACCAATCAGGAAGTGAAAGA 84657 | | ||||||||| ||||||||||| || |||| | |||||| | |||||| | | Sbjct 1138 AAAACTAAGTTCCCACTCACGACCCATATA-GCAAGCTACACCAAGTAAGAAGTGTAGAA 1080 Query 84658 CAACAAGTTGATAAGGTCCACCATTATATAGCCATTCGTCCATACTTGCTGCTTCCCAAA 84717 ||| |||| |||||| || ||||| |||| |||||| || | ||| |||||||| | Sbjct 1079 CAATTAGTTCATAAGGACCGCCATTGTATAACCATTCATCAACGGATGCCGCTTCCCATA 1020 Query 84718 TAGGATAGAAATGTAGACCAATAGCATTAGAGGATGGAACTACGGCACCAGAAATGATGT 84777 ||||||| ||||| | ||| ||||| ||| | |||| | |||||||||||| || | Sbjct 1019 TAGGATAAAAATGCAAACCTATAGCCGCAGAAGTAGGAATAATGGCACCAGAAATAATAT 960 Query 84778 TGTTTCCGTACATGAGAGAACCAGCGACTGGCTCACG 84814 ||||||| || | ||||| |||| || |||||||| Sbjct 959 TGTTTCCATAAAGTAGAGATCCAGAAACAGGCTCACG 923 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570864361015720