Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20psidii_20[genbank_20GCA_5F001443065.1_202015-11-13] 57,309 sequences; 129,776,072 total letters Query= NC_016656.1 Length=45890 Score E Sequences producing significant alignments: (Bits) Value seq15031 187 7e-43 >seq15031 Length=1318 Score = 187 bits (206), Expect = 7e-43 Identities = 284/398 (71%), Gaps = 6/398 (2%) Strand=Plus/Plus Query 25943 CGTGAGCCAGTTTCCGGCTCGTTAATGTACGGAAACAATATAATATCAGGAGCAGTCGTC 26002 |||||||| ||||| || || || | || ||||||||||| || || || || | | Sbjct 923 CGTGAGCCTGTTTCTGGATCTCTACTTTATGGAAACAATATTATTTCTGGTGCCATTATT 982 Query 26003 CCCTCCTCTAACGCAATCGGACTACATTTTTACCCGATCTGGGAAGCTGGCA-CACTGGA 26061 || | ||| || || || | |||||||| || || |||||||| |||| | | || Sbjct 983 CCTACTTCTGCGGCTATAGGTTTGCATTTTTATCCTATATGGGAAGC-GGCATCCGTTGA 1041 Query 26062 CGAGTGGCTATACAATGGCGGACCATATCAACTCATTATCTTCCACTTCTTAATAGGAGT 26121 || ||| ||||||||||||| || ||| |||| ||| | | ||||||||| | || || Sbjct 1042 TGAATGGTTATACAATGGCGGTCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGT 1101 Query 26122 AGC-AGC-ATATGCAGGGAGACAGTGGGAACTATCTTACAGACTAGGAATGAGACCATGG 26179 ||| || ||||| || | |||||||||| || | || || ||| | || ||| Sbjct 1102 AGCTTGCTATATG--GGTCGTGAGTGGGAACTTAGTTTTCGTCTGGGTATGCGTCCTTGG 1159 Query 26180 ATATTTGTTGCATATACAGCACCACTATCCGCAGCTCTCGCAGTGTTCTTAGTTTATCCT 26239 || |||||||||| |||| || | | || || || || ||||| | |||||| Sbjct 1160 ATTGCTGTTGCATATTCAGCTCCTGTTGCAGCGGCGACTGCTGTTTTCTTGATCTATCCT 1219 Query 26240 TTCGGACAAGGGAGTTTTAGTGATGGAATGCCTCTTGGTATCTCTGGTACTTTTAACTTT 26299 | || || || || ||| ||||| |||||||| || || ||||||||||| || ||| Sbjct 1220 ATTGGTCAGGGAAGCTTTTCAGATGGTATGCCTCTAGGAATTTCTGGTACTTTCAATTTT 1279 Query 26300 ATGTTCGTATTCCAAGCAGAACATAATATACTCATGCA 26337 ||| | ||||| || || || |||||||| || ||||| Sbjct 1280 ATGATTGTATTTCAGGCTGAGCATAATATTCTTATGCA 1317 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146626546173816