Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20psidii_20[genbank_20GCA_5F001443065.1_202015-11-13] 57,309 sequences; 129,776,072 total letters Query= NC_016657.1 Length=47055 Score E Sequences producing significant alignments: (Bits) Value seq15031 266 1e-66 >seq15031 Length=1318 Score = 266 bits (294), Expect = 1e-66 Identities = 299/399 (75%), Gaps = 6/399 (2%) Strand=Plus/Minus Query 36419 ATGCATAAGGATATTGTGTTCTGCCTGAAAGACAAACATAAAATTGAAAGTCCCTGAAAT 36478 ||||||||| ||||| || || |||||||| |||| ||||||||||||||| || ||||| Sbjct 1318 ATGCATAAGAATATTATGCTCAGCCTGAAATACAATCATAAAATTGAAAGTACCAGAAAT 1259 Query 36479 ACCAAGAGGCATACCATCAGAGAAACTCCCTTGTCCAAAAGGGTAGACTAAGAATACAGC 36538 || |||||||||||||| || || || || || |||| ||| |||| ||||| ||||| Sbjct 1258 TCCTAGAGGCATACCATCTGAAAAGCTTCCCTGACCAATAGGATAGATCAAGAAAACAGC 1199 Query 36539 AAATGCTGCTGCAACAGGGGCTGAATAAGCTACACATATCCACGGCCTCATACCTAGTCT 36598 | || ||||||||||| |||||||| || ||| ||||| || | |||||| || | Sbjct 1198 AGTCGCCGCTGCAACAGGAGCTGAATATGCAACAGCAATCCAAGGACGCATACCCAGACG 1139 Query 36599 ATAACTAAGTTCCCATTGTCGTCCCA---AGTAAGCTGAGATACCAATGAGAAAGTGGAA 36655 | ||||||||||||| | || |||| || ||||| | ||||| | ||||| | Sbjct 1138 AAAACTAAGTTCCCACTCACGACCCATATAGCAAGCT---ACACCAAGTAAGAAGTGTAG 1082 Query 36656 CACAATGAGTTGATATGGTCCTCCGTTATATAACCACTCGTCGAGGGTTGCAGCTTCCCA 36715 ||||| |||| ||| || || || || |||||||| || || | || ||| |||||||| Sbjct 1081 AACAATTAGTTCATAAGGACCGCCATTGTATAACCATTCATCAACGGATGCCGCTTCCCA 1022 Query 36716 GATTGGGTAGAAGTGAAGACCGATTGCGTTCGATGATGGGACGATTGCCCCAGAGATGAT 36775 || || || || || | ||| || || || | || | || || ||||| || || Sbjct 1021 TATAGGATAAAAATGCAAACCTATAGCCGCAGAAGTAGGAATAATGGCACCAGAAATAAT 962 Query 36776 GTTGTTTCCATAGAGTAATGCTCCTGAGACAGGCTCACG 36814 ||||||||||| |||| | ||| || ||||||||||| Sbjct 961 ATTGTTTCCATAAAGTAGAGATCCAGAAACAGGCTCACG 923 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 150352009104386