Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20psidii_20[genbank_20GCA_5F001443065.1_202015-11-13] 57,309 sequences; 129,776,072 total letters Query= NC_016659.1 Length=47536 Score E Sequences producing significant alignments: (Bits) Value seq15031 248 3e-61 >seq15031 Length=1318 Score = 248 bits (274), Expect = 3e-61 Identities = 295/399 (74%), Gaps = 6/399 (2%) Strand=Plus/Minus Query 25899 ATGCATAAGGATATTGTGTTCTGCCTGAAAGACAAACATAAAATTGAAAGTCCCTGAAAT 25958 ||||||||| ||||| || || |||||||| |||| ||||||||||||||| || ||||| Sbjct 1318 ATGCATAAGAATATTATGCTCAGCCTGAAATACAATCATAAAATTGAAAGTACCAGAAAT 1259 Query 25959 ACCAAGAGGCATACCATCAGAGAAACTCCCTTGTCCAAAAGGGTAGACTAAGAATACAGC 26018 || |||||||||||||| || || || || || |||| ||| |||| ||||| ||||| Sbjct 1258 TCCTAGAGGCATACCATCTGAAAAGCTTCCCTGACCAATAGGATAGATCAAGAAAACAGC 1199 Query 26019 AAATGCTGCTGCAACAGGGGCTGAATAAGCTACACATATCCACGGCCTCATGCCTAGTCT 26078 | || ||||||||||| |||||||| || ||| ||||| || | ||| || || | Sbjct 1198 AGTCGCCGCTGCAACAGGAGCTGAATATGCAACAGCAATCCAAGGACGCATACCCAGACG 1139 Query 26079 ATAACTAAGTTCCCATTGTCGTCCCA---AGTAAGCTGAGATGCCGATGAGAAAGTGGAA 26135 | ||||||||||||| | || |||| || ||||| | || | | ||||| | Sbjct 1138 AAAACTAAGTTCCCACTCACGACCCATATAGCAAGCT---ACACCAAGTAAGAAGTGTAG 1082 Query 26136 CACAATAAGTTGATATGGTCCACCGTTATACAACCACTCGTCGAGGGTTGCAGCTTCCCA 26195 ||||| |||| ||| || || || || || ||||| || || | || ||| |||||||| Sbjct 1081 AACAATTAGTTCATAAGGACCGCCATTGTATAACCATTCATCAACGGATGCCGCTTCCCA 1022 Query 26196 GATTGGGTAGAAGTGAAGACCGATTGCGTTAGATGACGGGACGATTGCCCCTGAGATGAT 26255 || || || || || | ||| || || ||| | || | || || || || || || Sbjct 1021 TATAGGATAAAAATGCAAACCTATAGCCGCAGAAGTAGGAATAATGGCACCAGAAATAAT 962 Query 26256 GTTGTTTCCATAGAGTAATGCTCCTGAGACAGGCTCACG 26294 ||||||||||| |||| | ||| || ||||||||||| Sbjct 961 ATTGTTTCCATAAAGTAGAGATCCAGAAACAGGCTCACG 923 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 151890161610484