Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20psidii_20[genbank_20GCA_5F001443065.1_202015-11-13] 57,309 sequences; 129,776,072 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq2225 104 3e-17 >seq2225 Length=6904 Score = 104 bits (114), Expect = 3e-17 Identities = 145/201 (72%), Gaps = 3/201 (1%) Strand=Plus/Minus Query 37500 ATCTGAAAACCATAAAAACACCTAGCTTCAGATAATTGAACATCGTTAAAAAACCTCTTA 37559 || ||||| ||||||||||| | ||| |||| | ||| || ||| | ||||| | | Sbjct 2488 ATTTGAAAGCCATAAAAACATCGAGCCTCAGCAATTTGGACTTCGCCACTGAACCTTTCA 2429 Query 37560 GCTAAGTTTTCATTAACTATCCCATCACTAGCTGCAAAGAAAGCAAGAACATATTTTATA 37619 ||| || || || || || ||||| ||| |||||||| ||||| |||| ||| ||| Sbjct 2428 ATTAAATTCTCGTTGACGATTCCATCTGAAGCAGCAAAGAAGGCAAGGACATGTTTGATA 2369 Query 37620 AAATGTCTTTCATC--ATTTGATAAT-TTTTTCCAATCATTAATATCTTTTGATAAATCA 37676 || ||| |||| || | || | | || | |||||||| ||||| ||||| |||||| Sbjct 2368 AAGTGTTTTTCGTCTGAATTCAGCTTGTTCTCCCAATCATGCATATCCTTTGACAAATCA 2309 Query 37677 ACTTCATCAACGGTCCAAAAA 37697 | ||| || | ||||| ||| Sbjct 2308 ATTTCCTCTGCAGTCCAGAAA 2288 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 591892486456360