Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20psidii_20[genbank_20GCA_5F001443065.1_202015-11-13] 57,309 sequences; 129,776,072 total letters Query= NC_019443.1 Length=172879 Score E Sequences producing significant alignments: (Bits) Value seq15031 205 1e-47 >seq15031 Length=1318 Score = 205 bits (226), Expect = 1e-47 Identities = 283/395 (72%), Gaps = 6/395 (2%) Strand=Plus/Plus Query 162643 GAACCTGTTGCAGGTTCACTTCTCTATGGTAACAACATCATCTCTGGTGCTGTCGTTCCT 162702 || |||||| | || || || || ||||| ||||| || || |||||||| | ||||| Sbjct 926 GAGCCTGTTTCTGGATCTCTACTTTATGGAAACAATATTATTTCTGGTGCCATTATTCCT 985 Query 162703 AGTTCAAATGCTATTGGTCTTCACTTCTATCCTATCTGGGAAGCAGCAACTCTTGATGAG 162762 | ||| ||||| ||| | || || |||||||| |||||||| ||| | ||||||| Sbjct 986 ACTTCTGCGGCTATAGGTTTGCATTTTTATCCTATATGGGAAGCGGCATCCGTTGATGAA 1045 Query 162763 TGGTTGTATAATGGTGGACCTTTCCAACTTGTAGTCTTCCACTTCCTTATCGGAATCACA 162822 ||||| || ||||| || |||| |||| | || | |||||| | | || | | Sbjct 1046 TGGTTATACAATGGCGGTCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGT---A 1102 Query 162823 GCATACTGT---GGTCGTCAGTGGGAACTTTCTTACCGCTTAGGTATGCGTCCTTGGATC 162879 || | || | |||||| ||||||||||| || || | ||||||||||||||||| Sbjct 1103 GCTTGCTATATGGGTCGTGAGTGGGAACTTAGTTTTCGTCTGGGTATGCGTCCTTGGATT 1162 Query 162880 TGTGTTGCATACTCTGCACCAGTATCTGCAGCATTCGCTGTGTTCTTGGTCTATCCTTTC 162939 ||||||||| || || || || | || || ||||| |||||| |||||||| | Sbjct 1163 GCTGTTGCATATTCAGCTCCTGTTGCAGCGGCGACTGCTGTTTTCTTGATCTATCCTATT 1222 Query 162940 GGTCAAGGTTCTTTCTCTGACGCAATGCCTCTTGGTATTTCTGGTACTTTTAACTACATG 162999 ||||| || || || || | |||||||| || |||||||||||||| || | ||| Sbjct 1223 GGTCAGGGAAGCTTTTCAGATGGTATGCCTCTAGGAATTTCTGGTACTTTCAATTTTATG 1282 Query 163000 TTCGTGTTCCAAGCAGAGCACAACATCCTAATGCA 163034 | || || || || ||||| || || || ||||| Sbjct 1283 ATTGTATTTCAGGCTGAGCATAATATTCTTATGCA 1317 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 552688590789960