Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20psidii_20[genbank_20GCA_5F001443065.1_202015-11-13] 57,309 sequences; 129,776,072 total letters Query= NC_020835.1 Length=47325 Score E Sequences producing significant alignments: (Bits) Value seq15031 224 3e-54 >seq15031 Length=1318 Score = 224 bits (248), Expect = 3e-54 Identities = 292/399 (73%), Gaps = 6/399 (2%) Strand=Plus/Minus Query 18281 ATGCATAAGGATATTGTGTTCGGCTTGGAATACGAACATGAAATTGAAAGTACCGCTAAT 18340 ||||||||| ||||| || || || || ||||| | ||| |||||||||||||| ||| Sbjct 1318 ATGCATAAGAATATTATGCTCAGCCTGAAATACAATCATAAAATTGAAAGTACCAGAAAT 1259 Query 18341 ACCAAGAGGCATACCATCAGAGAAACTCCCTTGTCCAAAAGGATAAA-CGAGAAATACTG 18399 || |||||||||||||| || || || || || |||| |||||| | | ||||| || Sbjct 1258 TCCTAGAGGCATACCATCTGAAAAGCTTCCCTGACCAATAGGATAGATCAAGAAA-AC-- 1202 Query 18400 AGAAG--GCAGCTGCTACTGGTGCGGAATAAGCAACACAAATCCACGGGCGCATACCTAG 18457 || || || ||||| || || || ||||| |||||| |||||| || |||||||| || Sbjct 1201 AGCAGTCGCCGCTGCAACAGGAGCTGAATATGCAACAGCAATCCAAGGACGCATACCCAG 1142 Query 18458 TCTATAACTAAGTTCCCATTGTCGTCCCATGTAAGCTGCGATGCCGATGAGAAAGTGGAA 18517 | | ||||||||||||| | || ||||| || || | || | | ||||| | Sbjct 1141 ACGAAAACTAAGTTCCCACTCACGACCCATATAGCAAGCTACACCAAGTAAGAAGTGTAG 1082 Query 18518 CACAATGAGTTGATATGGTCCTCCGTTATATAACCACTCGTCGAGGGTTGCAGCTTCCCA 18577 ||||| |||| ||| || || || || |||||||| || || | || ||| |||||||| Sbjct 1081 AACAATTAGTTCATAAGGACCGCCATTGTATAACCATTCATCAACGGATGCCGCTTCCCA 1022 Query 18578 GATTGGGTAGAAGTGAAGACCGATTGCGTTAGATGACGGGACGATTGCCCCTGATATGAT 18637 || || || || || | ||| || || ||| | || | || || || || || || Sbjct 1021 TATAGGATAAAAATGCAAACCTATAGCCGCAGAAGTAGGAATAATGGCACCAGAAATAAT 962 Query 18638 GTTGTTTCCATAGAGTAAGGCTCCTGAGACAGGCTCACG 18676 ||||||||||| |||| | ||| || ||||||||||| Sbjct 961 ATTGTTTCCATAAAGTAGAGATCCAGAAACAGGCTCACG 923 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 151215421114046