Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20psidii_20[genbank_20GCA_5F001443065.1_202015-11-13] 57,309 sequences; 129,776,072 total letters Query= NC_020838.1 Length=45728 Score E Sequences producing significant alignments: (Bits) Value seq15031 199 1e-46 >seq15031 Length=1318 Score = 199 bits (220), Expect = 1e-46 Identities = 284/397 (72%), Gaps = 2/397 (1%) Strand=Plus/Minus Query 21917 ATGCATAAGAATATTGTGCTCAGCCTGGAACACCAGCATGTAGTTGAAGGTGCCGGATAT 21976 ||||||||||||||| ||||||||||| || || | ||| | ||||| || || || || Sbjct 1318 ATGCATAAGAATATTATGCTCAGCCTGAAATACAATCATAAAATTGAAAGTACCAGAAAT 1259 Query 21977 CCCCAAGGGCATAGCATCAGAAAAAGAGCCCTGTCCAAACGGATAAACAAGGAACACAGC 22036 || | |||||| |||| ||||| ||||| |||| ||||| | | ||| ||||| Sbjct 1258 TCCTAGAGGCATACCATCTGAAAAGCTTCCCTGACCAATAGGATAGATCAAGAAAACAGC 1199 Query 22037 AGTCGCAGCGGCGACAGGAGCAGAGTACGCAACAAAGATCCAGGGCCTCATCCCTAGTCG 22096 |||||| || || |||||||| || || |||||| ||||| || | ||| || || || Sbjct 1198 AGTCGCCGCTGCAACAGGAGCTGAATATGCAACAGCAATCCAAGGACGCATACCCAGACG 1139 Query 22097 ATAGCTAAGTTCCCACTCTCGTCCCATGTAAGCAAAG-ACGCCAATGAGGAAGTGGAATA 22155 | | |||||||||||||| || ||||| || |||| || |||| | |||||| | | Sbjct 1138 AAAACTAAGTTCCCACTCACGACCCATATA-GCAAGCTACACCAAGTAAGAAGTGTAGAA 1080 Query 22156 CGGTGAGTTGGAATGGACCGCCGTTGTACAGCCATTCATCAAGTGTAGCAGCTTCCCAAA 22215 | | |||| | |||||||| ||||| | ||||||||||| | || |||||||| | Sbjct 1079 CAATTAGTTCATAAGGACCGCCATTGTATAACCATTCATCAACGGATGCCGCTTCCCATA 1020 Query 22216 TTGGGTAGAAGTGTAGTCCGATGGCATTACTGCTCGGAACGACGGCTCCTGATATGATGT 22275 | || || || || | || || || | | |||| | ||| || || || || | Sbjct 1019 TAGGATAAAAATGCAAACCTATAGCCGCAGAAGTAGGAATAATGGCACCAGAAATAATAT 960 Query 22276 TGTTACCATACAACAGGGAGCCAGCGACGGGTTCTCG 22312 |||| ||||| | || || |||| || || || || Sbjct 959 TGTTTCCATAAAGTAGAGATCCAGAAACAGGCTCACG 923 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146108498968020