Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20psidii_20[genbank_20GCA_5F001443065.1_202015-11-13] 57,309 sequences; 129,776,072 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq8935 107 1e-18 >seq8935 Length=3822 Score = 107 bits (118), Expect = 1e-18 Identities = 128/174 (74%), Gaps = 0/174 (0%) Strand=Plus/Plus Query 25933 CATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTT 25992 |||||| | || || ||||| | || ||||| | || | || | |||||||||| Sbjct 280 CATAAAAAGGTCAGGGATCCAAAGGGCGTAAAAGAGGTCACGGGCACGATTTTCTTCTTT 339 Query 25993 TCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATA 26052 || ||||| ||| ||||||| || ||||||||| ||| | ||||| ||||||||||| Sbjct 340 GCCATGATTTTTTCTTAGATCCAACCAATCAAAAACATCGGCATGCCAAGGTTCTAAATA 399 Query 26053 GATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGT 26106 || ||||| ||| ||| || |||||||||||| ||||||| ||||| Sbjct 400 AATCGCAAAGGCACCGGGTCTCTTGTTTCCACCTTGATCAACGTATCGAGCAGT 453 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 252863263342175