Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20psidii_20[genbank_20GCA_5F001443065.1_202015-11-13] 57,309 sequences; 129,776,072 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq15031 233 3e-56 seq37735 203 4e-47 >seq15031 Length=1318 Score = 233 bits (258), Expect = 3e-56 Identities = 292/397 (74%), Gaps = 4/397 (1%) Strand=Plus/Minus Query 27181 TGCATAAGGATATTGTGTTCTGCCTGGAATACAAGCATGTAGTTAAAAGTACCAGAGATA 27240 |||||||| ||||| || || ||||| ||||||| ||| | || ||||||||||| || Sbjct 1317 TGCATAAGAATATTATGCTCAGCCTGAAATACAATCATAAAATTGAAAGTACCAGAAATT 1258 Query 27241 CCAAGAGGCATAGCATCGGAGAAAGAACCTTGACCGAAAGGATAGACGAGGAATACTGCA 27300 || ||||||||| |||| || || || ||||| | |||||||| | ||| || ||| Sbjct 1257 CCTAGAGGCATACCATCTGAAAAGCTTCCCTGACCAATAGGATAGATCAAGAAAACAGCA 1198 Query 27301 CTCGCAGCAGCGACTGGAGCAGAATATGCTACACAGATCCATGGACGCATACCTAAACGA 27360 |||| || || || ||||| |||||||| ||| ||||| ||||||||||| | |||| Sbjct 1197 GTCGCCGCTGCAACAGGAGCTGAATATGCAACAGCAATCCAAGGACGCATACCCAGACGA 1138 Query 27361 TATGAGAGTTCCCACTCACGTCCCATATAAGCATAG--ATGCCGATAAGGAAGTGGAAGA 27418 | |||||||||||||| ||||||| |||| || | || | | |||||| | | Sbjct 1137 AAACTAAGTTCCCACTCACGACCCATAT-AGCA-AGCTACACCAAGTAAGAAGTGTAGAA 1080 Query 27419 CTACCAGTTGGAAAGGACCACCGTTATACAACCACTCATCGAGTGATGCTGCTTCCCAGA 27478 | | |||| ||||||| || || || ||||| ||||| | ||||| |||||||| | Sbjct 1079 CAATTAGTTCATAAGGACCGCCATTGTATAACCATTCATCAACGGATGCCGCTTCCCATA 1020 Query 27479 TTGGGTAGAAGTGGAGACCGATTGCATTTGAACTTGGGACAACTGCACCAGAAATGATGT 27538 | || || || || | ||| || || ||| | || | || ||||||||||| || | Sbjct 1019 TAGGATAAAAATGCAAACCTATAGCCGCAGAAGTAGGAATAATGGCACCAGAAATAATAT 960 Query 27539 TGTTGCCATACATAAGTGAACCAGCAACGGGTTCACG 27575 |||| ||||| | || || |||| ||| || ||||| Sbjct 959 TGTTTCCATAAAGTAGAGATCCAGAAACAGGCTCACG 923 >seq37735 Length=758 Score = 203 bits (224), Expect = 4e-47 Identities = 276/377 (73%), Gaps = 6/377 (2%) Strand=Plus/Plus Query 23952 GACTGTCCCAAAGGATAGATGAGGAATACAGACACGAATACAGCAATAGGACCAGAAAAA 24011 ||||| |||| ||||| || ||||||||||| || || |||||||| ||||| || || Sbjct 2 GACTGACCCAGTGGATAAATAAGGAATACAGAAACAAAAACAGCAATTGGACCTGAGAAT 61 Query 24012 GCAATCGCATTGTAGGGACGGATTCCAATTAGA-CGTGCCAGTTCAAACTGACGTAACAT 24070 ||||| ||||| || || || | | || ||| || || |||||||| ||||||||||| Sbjct 62 GCAATTGCATTATAAGGCCGCAATTGAA-CAGATCGAGCAAGTTCAAATTGACGTAACAT 120 Query 24071 AAAACCTATAAGTGCAAAGGCACCGTGGAGAGCAACAAAGGACCAAAGCCCTCCAAGTTG 24130 |||||||| | | | || |||||||||||||||||||| | ||| || || || | ||| Sbjct 121 GAAACCTATTAATCCGAAAGCACCGTGGAGAGCAACAAAAGTCCACAGACCACCTAATTG 180 Query 24131 GAGCCACCGTTGAAAGTCCCCTTGAGACTCAGGACCCCAAAGTAGAAGAAGAGAATGACC 24190 ||| || ||| || || || | ||||||||||| |||| | | ||| || | Sbjct 181 ACACCAACGGGTAAAATCTCCCTGTGCTTCAGGACCCCACAGTAACAACAAAGAGTGTGC 240 Query 24191 CATAGC-GTCAGCAGGCGTCGAGACAGCTGCCGTAAGAAAGTTAGCA-CCCTCAAGATAG 24248 | ||| | |||||| || ||||| ||||| || | ||||| ||| || || | ||| Sbjct 241 TA-AGCTATTAGCAGGAGTGGAGACTGCTGCGGTTAAGAAGTT-GCATCCTTCCAAATAA 298 Query 24249 GAACTAGCAAGTCCATGGGTGTACCAACTCGTAACAAAAGCTGTGCCAGTAAGCCAACCG 24308 ||||| || | |||||| || ||||| || ||||| | ||| || || | |||||| Sbjct 299 GAACTTGCCAATCCATGAGTATACCATGAAGTTACAAAGGTTGTACCTGTGAACCAACCC 358 Query 24309 CCAATGGCAAGATAAGC 24325 || | ||| | ||| || Sbjct 359 CCCAAGGCGAAATAGGC 375 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 665017664767880