Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20psidii_20[genbank_20GCA_5F001443065.1_202015-11-13] 57,309 sequences; 129,776,072 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq12608 120 4e-22 >seq12608 Length=2986 Score = 120 bits (132), Expect = 4e-22 Identities = 250/367 (68%), Gaps = 4/367 (1%) Strand=Plus/Minus Query 76211 CCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTT-ATTTTGTGCCGCTACGCATT 76269 || ||||| | || |||||||| || || |||| ||| | | || || | | || Sbjct 2318 CCCATTGGCATCGGGGTTCAAGGACTTGCCGATGCTTTTCAGATCCTGAAACTTC-CGTT 2260 Query 76270 TGATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATC 76329 ||||||| |||||| ||| | |||| | | || ||||| || | |||||||| | Sbjct 2259 TGATTCACCTGAAGCGAAGAAATTGAACTCACAAATATTTGAGACACTCTATCACGCGGC 2200 Query 76330 CCTGGAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTC 76389 |||||||| | |||| | || ||| | || || ||||| || || | || || Sbjct 2199 GCTGGAGGCCTCTAATGAACTAGCCATTGCCAATGGCTCTTATGAAACTTTCCAAGGCTC 2140 Query 76390 TCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACC-AAGCTCAACT 76448 ||| || |||||| | ||||| ||||||||||||| | || ||||| | | | | Sbjct 2139 TCCTGCAAGCCAAGGCATACTTCAATTTGATATGTGGG-ATGTCAAACCGACGGACTTGT 2081 Query 76449 ACGACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGA 76508 || |||||| || || ||| ||||| | | || | || ||| |||||||| Sbjct 2080 GGGAATGGGATAACCTAAAAGAAAAAATCAAAGTCAGCGGATTGCGAAACTCTCTTTTGA 2021 Query 76509 TGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAAC 76568 | || || |||||||| || || ||| ||||| |||| |||||||||||||| | Sbjct 2020 TTGCGCCGATGCCAACTGCATCAACCAGCCAAATTCTGGGCTTCAATGAATGCTTTGAGC 1961 Query 76569 CATACAC 76575 ||||||| Sbjct 1960 CATACAC 1954 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596142239909920