Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20psidii_20[genbank_20GCA_5F001443065.1_202015-11-13] 57,309 sequences; 129,776,072 total letters Query= NC_020855.1 Length=192497 Score E Sequences producing significant alignments: (Bits) Value seq15031 178 2e-39 >seq15031 Length=1318 Score = 178 bits (196), Expect = 2e-39 Identities = 277/396 (70%), Gaps = 0/396 (0%) Strand=Plus/Minus Query 8337 ATGCATAAGAATGTTATGCTCTGCTTGGAATACGAACATGAAGTTAAACGTACCAGAAAT 8396 |||||||||||| |||||||| || || ||||| | ||| || || || ||||||||||| Sbjct 1318 ATGCATAAGAATATTATGCTCAGCCTGAAATACAATCATAAAATTGAAAGTACCAGAAAT 1259 Query 8397 ACCTAGAGGCATTCCATCAGAGAATGAACCCTGACCAAATGGATATACTAAGAACACTGC 8456 ||||||||||| ||||| || || |||||||||| ||||| | ||||| || || Sbjct 1258 TCCTAGAGGCATACCATCTGAAAAGCTTCCCTGACCAATAGGATAGATCAAGAAAACAGC 1199 Query 8457 GAAAGCAGCAGATACTGGAGCACTATATGCTACACAGATCCATGGTCTCATACCTAAGCG 8516 || || | || ||||| |||||| ||| ||||| || | |||||| | || Sbjct 1198 AGTCGCCGCTGCAACAGGAGCTGAATATGCAACAGCAATCCAAGGACGCATACCCAGACG 1139 Query 8517 GTATGATAACTCCCACTGTCTACCCATGTAAGCAGAAATTCCAATAAGGAAGTGGAAGAT 8576 | | ||||||| | |||||| || || | |||| | |||||| | | Sbjct 1138 AAAACTAAGTTCCCACTCACGACCCATATAGCAAGCTACACCAAGTAAGAAGTGTAGAAC 1079 Query 8577 AACCAACTGATATGGACCTCCGTTATACAACCACTCATCTAATGTGGCAGCTTCCCAAAT 8636 || | | ||| ||||| || || || ||||| ||||| | | || |||||||| || Sbjct 1078 AATTAGTTCATAAGGACCGCCATTGTATAACCATTCATCAACGGATGCCGCTTCCCATAT 1019 Query 8637 GGGATAGAAGTGTAATCCAATAGCGTTGGAAGATGGAACGACAGCACCAGAGATGATGTT 8696 ||||| || || || || ||||| |||| |||| | |||||||| || || || Sbjct 1018 AGGATAAAAATGCAAACCTATAGCCGCAGAAGTAGGAATAATGGCACCAGAAATAATATT 959 Query 8697 GTTTCCATACATGAATGAACCTGCAACAGGTTCACG 8732 ||||||||| | | || || | |||||| ||||| Sbjct 958 GTTTCCATAAAGTAGAGATCCAGAAACAGGCTCACG 923 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 615421219271480