Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20psidii_20[genbank_20GCA_5F001443065.1_202015-11-13] 57,309 sequences; 129,776,072 total letters Query= NC_020874.1 Length=46198 Score E Sequences producing significant alignments: (Bits) Value seq15031 187 7e-43 >seq15031 Length=1318 Score = 187 bits (206), Expect = 7e-43 Identities = 284/398 (71%), Gaps = 6/398 (2%) Strand=Plus/Minus Query 26324 TGCATGAGTATATTATGTTCTGCTTGGAATACGAACATAAAGTTAAAAGTACCAGAGATA 26383 ||||| || |||||||| || || || ||||| | |||||| || ||||||||||| || Sbjct 1317 TGCATAAGAATATTATGCTCAGCCTGAAATACAATCATAAAATTGAAAGTACCAGAAATT 1258 Query 26384 CCAAGAGGCATTCCATCACTAAAACTCCCTTGTCCGAAAGGATAAACTAAGAACACTGCG 26443 || |||||||| ||||| ||| || || || || | |||||| | ||||| || || Sbjct 1257 CCTAGAGGCATACCATCTGAAAAGCTTCCCTGACCAATAGGATAGATCAAGAAAACAGCA 1198 Query 26444 AGAGCTGCGGATAGTGGTGCTGTATATGCAACAAATATCCATGGTCTCATTCCTAGTCTG 26503 || || | | || |||| |||||||||| ||||| || | ||| || || | Sbjct 1197 GTCGCCGCTGCAACAGGAGCTGAATATGCAACAGCAATCCAAGGACGCATACCCAGACGA 1138 Query 26504 TAAGATAGTTCCCACTGTCTCCCTGCATAT-GCT-GCTACTCCTATTAAGAAGTGGAAGA 26561 || |||||||||| | || ||||| || ||||| || | ||||||||| | | Sbjct 1137 AAACTAAGTTCCCACTCACGACC--CATATAGCAAGCTACACCAAGTAAGAAGTGTAGAA 1080 Query 26562 TAATGAGTTGATATGGTCCGCCATTGTATAGCCACTCGTCCAGTG-TGCCAGCTTCCCAG 26620 ||| |||| ||| || ||||||||||||| ||| || || | | |||| |||||||| Sbjct 1079 CAATTAGTTCATAAGGACCGCCATTGTATAACCATTCATCAACGGATGCC-GCTTCCCAT 1021 Query 26621 ATCGGGTAAAAATGTAGTCCGATTGCGTTAGAGGAGGGGACGACTGCTCCTGATATTATA 26680 || || |||||||| | || || || ||| | || | | || || || || ||| Sbjct 1020 ATAGGATAAAAATGCAAACCTATAGCCGCAGAAGTAGGAATAATGGCACCAGAAATAATA 961 Query 26681 TTGTTTCCGTACATTAACGAGCCGGAAACTGGCTCACG 26718 |||||||| || | || || || ||||| |||||||| Sbjct 960 TTGTTTCCATAAAGTAGAGATCCAGAAACAGGCTCACG 923 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 147611475429280