Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20psidii_20[genbank_20GCA_5F001443065.1_202015-11-13] 57,309 sequences; 129,776,072 total letters Query= NC_020875.1 Length=182801 Score E Sequences producing significant alignments: (Bits) Value seq15031 214 2e-50 >seq15031 Length=1318 Score = 214 bits (236), Expect = 2e-50 Identities = 287/398 (72%), Gaps = 6/398 (2%) Strand=Plus/Plus Query 155110 CGTGAACCCGTCGCTGGTTCTTTAATGTATGGTAACAACATCATCTCTGGTGCTGTTGTC 155169 ||||| || || |||| ||| || | ||||| ||||| || || |||||||| || | Sbjct 923 CGTGAGCCTGTTTCTGGATCTCTACTTTATGGAAACAATATTATTTCTGGTGCCATTATT 982 Query 155170 CCTAGTTCAAACGCAATTGGTCTCCACTTCTATCCTATTTGGGAAGCAGCAACTCTTGAT 155229 |||| ||| || || ||| | || || |||||||| |||||||| ||| | ||||| Sbjct 983 CCTACTTCTGCGGCTATAGGTTTGCATTTTTATCCTATATGGGAAGCGGCATCCGTTGAT 1042 Query 155230 GAGTGGTTGTACAATGGTGGTCCTTTCCAACTTGTAGTCTTCCACTTCCTTATCGGAATC 155289 || ||||| |||||||| ||||||| |||| | || | |||||| | | || | Sbjct 1043 GAATGGTTATACAATGGCGGTCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGT- 1101 Query 155290 ACAGCATACTGT---GGTCGTCAGTGGGAACTTTCTTACCGTCTTGGCATGCGTCCTTGG 155346 ||| | || | |||||| ||||||||||| || ||||| || |||||||||||| Sbjct 1102 --AGCTTGCTATATGGGTCGTGAGTGGGAACTTAGTTTTCGTCTGGGTATGCGTCCTTGG 1159 Query 155347 ATCTGTGTTGCATACTCTGCACCAGTATCTGCTGCGTTCGCTGTATTCCTTGTTTATCCT 155406 || ||||||||| || || || || | || ||| ||||| ||| | | |||||| Sbjct 1160 ATTGCTGTTGCATATTCAGCTCCTGTTGCAGCGGCGACTGCTGTTTTCTTGATCTATCCT 1219 Query 155407 TTCGGTCAAGGTTCTTTCTCTGATGCGATGCCTCTTGGTATCTCTGGTACTTTTAACTAT 155466 | ||||| || || || |||| |||||||| || || ||||||||||| || | | Sbjct 1220 ATTGGTCAGGGAAGCTTTTCAGATGGTATGCCTCTAGGAATTTCTGGTACTTTCAATTTT 1279 Query 155467 ATGTTCGTGTTCCAAGCAGAACACAATATCCTTATGCA 155504 ||| | || || || || || || ||||| |||||||| Sbjct 1280 ATGATTGTATTTCAGGCTGAGCATAATATTCTTATGCA 1317 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 584416245994040