Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20psidii_20[genbank_20GCA_5F001443065.1_202015-11-13] 57,309 sequences; 129,776,072 total letters Query= NC_021071.1 Length=177211 Score E Sequences producing significant alignments: (Bits) Value seq15031 208 9e-49 >seq15031 Length=1318 Score = 208 bits (230), Expect = 9e-49 Identities = 284/395 (72%), Gaps = 6/395 (2%) Strand=Plus/Minus Query 67809 TGCATAAGGATGTTGTGCTCTGCTTGGAACACGAACATGTAGTTAAAAGTACCAGAAATA 67868 |||||||| || || ||||| || || || || | ||| | || |||||||||||||| Sbjct 1317 TGCATAAGAATATTATGCTCAGCCTGAAATACAATCATAAAATTGAAAGTACCAGAAATT 1258 Query 67869 CCAAGAGGCATTGCGTCAGAGAAAGAACCTTGACCGAAAGGATAGACCAAGAACACAGCG 67928 || |||||||| | || || || || ||||| | |||||||| |||||| ||||| Sbjct 1257 CCTAGAGGCATACCATCTGAAAAGCTTCCCTGACCAATAGGATAGATCAAGAAAACAGCA 1198 Query 67929 AATGCTGCAGACACTGGAGCAGAGTATGCTACACAGATCCAAGGACGCATACCAAGACGG 67988 || || | || ||||| || ||||| ||| ||||||||||||||||| ||||| Sbjct 1197 GTCGCCGCTGCAACAGGAGCTGAATATGCAACAGCAATCCAAGGACGCATACCCAGACGA 1138 Query 67989 TAAGAAAGTTCCCACTGACGACC---ACAGTATGCTGTGATTCCGATAAGGAAGTGGAAG 68045 || ||||||||||| |||||| | || | ||| | || | | |||||| | Sbjct 1137 AAACTAAGTTCCCACTCACGACCCATATAGCAAGCT---ACACCAAGTAAGAAGTGTAGA 1081 Query 68046 ACTACAAGTTGGAAAGGTCCACCATTATACAACCACTCATCTAGAGTTGCTGCTTCCCAG 68105 || | |||| |||| || ||||| || ||||| ||||| | | ||| |||||||| Sbjct 1080 ACAATTAGTTCATAAGGACCGCCATTGTATAACCATTCATCAACGGATGCCGCTTCCCAT 1021 Query 68106 ATAGGATAGAAGTGAAGACCGATTGCGTTTGAACTAGGAACAACAGCACCAGAAATGATG 68165 |||||||| || || | ||| || || ||| |||||| || ||||||||||| || Sbjct 1020 ATAGGATAAAAATGCAAACCTATAGCCGCAGAAGTAGGAATAATGGCACCAGAAATAATA 961 Query 68166 TTGTTACCGTACATGAGCGAACCTGCAACAGGTTC 68200 ||||| || || | || || || | |||||| || Sbjct 960 TTGTTTCCATAAAGTAGAGATCCAGAAACAGGCTC 926 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 566541060286440