Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20psidii_20[genbank_20GCA_5F001443065.1_202015-11-13] 57,309 sequences; 129,776,072 total letters Query= NC_021072.1 Length=178807 Score E Sequences producing significant alignments: (Bits) Value seq15031 269 3e-67 seq37735 167 3e-36 >seq15031 Length=1318 Score = 269 bits (298), Expect = 3e-67 Identities = 299/396 (76%), Gaps = 2/396 (1%) Strand=Plus/Minus Query 68290 TGCATCAGGATGTTGTGCTCTGCTTGGAACACCAGCATGTAGTTGAAAGTACCAGAAATG 68349 ||||| || || || ||||| || || || || | ||| | ||||||||||||||||| Sbjct 1317 TGCATAAGAATATTATGCTCAGCCTGAAATACAATCATAAAATTGAAAGTACCAGAAATT 1258 Query 68350 CCGAGAGGCATTGCGTCAGAGAACGAACCTTGACCGAAAGGATAGACCAGGAAGACTGCG 68409 || |||||||| | || || || || ||||| | |||||||| || ||| || || Sbjct 1257 CCTAGAGGCATACCATCTGAAAAGCTTCCCTGACCAATAGGATAGATCAAGAAAACAGCA 1198 Query 68410 GATGCTGCTGCAACAGGTGCAGAGTATGCAACACAGATCCAAGGACGCATACCAAGACGA 68469 | || ||||||||||| || || ||||||||| ||||||||||||||||| |||||| Sbjct 1197 GTCGCCGCTGCAACAGGAGCTGAATATGCAACAGCAATCCAAGGACGCATACCCAGACGA 1138 Query 68470 TAGGAAAGTTCCCATTCACGTCCCATGTATGCAAAG-ATACCAATCAGGAAGTGAAAGAT 68528 | ||||||||| ||||| ||||| || |||| | ||||| | |||||| | | Sbjct 1137 AAACTAAGTTCCCACTCACGACCCATATA-GCAAGCTACACCAAGTAAGAAGTGTAGAAC 1079 Query 68529 TACGAGTTGGAAAGGACCACCATTGTACAACCACTCATCAAGGGTTGCTGCTTCCCAAAT 68588 | |||| ||||||| |||||||| ||||| ||||||| || ||| |||||||| || Sbjct 1078 AATTAGTTCATAAGGACCGCCATTGTATAACCATTCATCAACGGATGCCGCTTCCCATAT 1019 Query 68589 GGGATAAAAGTGAAGACCAATTGCATTTGAACTAGGAACAACAGCACCAGAAATGATGTT 68648 |||||||| || | ||| || || ||| |||||| || ||||||||||| || || Sbjct 1018 AGGATAAAAATGCAAACCTATAGCCGCAGAAGTAGGAATAATGGCACCAGAAATAATATT 959 Query 68649 GTTACCATACAGAAGTGAACCAGCAACAGGTTCACG 68684 ||| ||||| || || || |||| |||||| ||||| Sbjct 958 GTTTCCATAAAGTAGAGATCCAGAAACAGGCTCACG 923 >seq37735 Length=758 Score = 167 bits (184), Expect = 3e-36 Identities = 259/362 (72%), Gaps = 6/362 (2%) Strand=Plus/Plus Query 67152 GATTGACCCAGAGGGTAGATGAGAAAGACACTAACAAAAACAGCGATAGGACCAGAGAAC 67211 || |||||||| || || || || || ||| |||||||||||| || ||||| ||||| Sbjct 2 GACTGACCCAGTGGATAAATAAGGAATACAGAAACAAAAACAGCAATTGGACCTGAGAAT 61 Query 67212 GCAATAGCATTGTAGGGACGGATACCGATGAGA-CGTGCCAGTTCAAACTGGCGAAGCAT 67270 ||||| ||||| || || || | | || ||| || || |||||||| || || | ||| Sbjct 62 GCAATTGCATTATAAGGCCGCA-ATTGAACAGATCGAGCAAGTTCAAATTGACGTAACAT 120 Query 67271 GAAACCAATTAGAGCGAAAGCCCCGTGGAGCGCCACAAAATTCCAGAGTCCTCCAAGTTG 67330 |||||| |||| ||||||| |||||||| || |||||| |||| || || || | ||| Sbjct 121 GAAACCTATTAATCCGAAAGCACCGTGGAGAGCAACAAAAGTCCACAGACCACCTAATTG 180 Query 67331 GATCCAGCGGACGAAATCCCCCTGAGACTCAGGACCCCAAAGTAGAAGAAGAGAATGACC 67390 ||| ||| ||||| ||||| | ||||||||||| |||| | | ||| || | Sbjct 181 ACACCAACGGGTAAAATCTCCCTGTGCTTCAGGACCCCACAGTAACAACAAAGAGTGTGC 240 Query 67391 CATAGC-ATCAGCAGGCGTTGACACAGCCGCTGTGAGAAAATTAGCA-CCCTCAAGATAA 67448 | ||| || |||||| || || || || || || | | || | ||| || || | |||| Sbjct 241 TA-AGCTATTAGCAGGAGTGGAGACTGCTGCGGTTA-AGAAGTTGCATCCTTCCAAATAA 298 Query 67449 CTAGACGCGAGTCCGTGAGTGTACCAGCTTGTGACAAACGTAGTACCAGTAAGCCAGCCA 67508 | || | ||| ||||| ||||| || ||||| || ||||| || | ||| || Sbjct 299 GAACTTGCCAATCCATGAGTATACCATGAAGTTACAAAGGTTGTACCTGTGAACCAACCC 358 Query 67509 CC 67510 || Sbjct 359 CC 360 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571644601679880