Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20psidii_20[genbank_20GCA_5F001443065.1_202015-11-13] 57,309 sequences; 129,776,072 total letters Query= NC_021536.1 Length=171797 Score E Sequences producing significant alignments: (Bits) Value seq15031 255 6e-63 seq37735 181 1e-40 >seq15031 Length=1318 Score = 255 bits (282), Expect = 6e-63 Identities = 299/398 (75%), Gaps = 6/398 (2%) Strand=Plus/Plus Query 150980 CGTGAACCCGTTGCTGGTTCTCTGATGTACGGTAACAACATCATCTCTGGTGCTGTTGTT 151039 ||||| || ||| |||| ||||| | || || ||||| || || |||||||| || || Sbjct 923 CGTGAGCCTGTTTCTGGATCTCTACTTTATGGAAACAATATTATTTCTGGTGCCATTATT 982 Query 151040 CCTTCTTCTAACGCTATCGGTCTGCACTTCTATCCCATCTGGGAAGCAGCCTCTCTCGAT 151099 ||| ||||| ||||| ||| |||| || ||||| || |||||||| || || | ||| Sbjct 983 CCTACTTCTGCGGCTATAGGTTTGCATTTTTATCCTATATGGGAAGCGGCATCCGTTGAT 1042 Query 151100 GAATGGCTCTACAACGGTGGTCCTTTCCAACTCGTTGTCTTCCACTTCCTGATTGGTAT- 151158 |||||| | ||||| || ||||||| |||| |||| | |||||| | ||||| | Sbjct 1043 GAATGGTTATACAATGGCGGTCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGTA 1102 Query 151159 -CTATGCTTACATGGGTCGTGAGTGGGAACTGTCTTACCGCTTGGGTATGCGTCCCTGGA 151217 || |||| | |||||||||||||||||||| || || ||||||||||||| |||| Sbjct 1103 GCT-TGCT-ATATGGGTCGTGAGTGGGAACTTAGTTTTCGTCTGGGTATGCGTCCTTGGA 1160 Query 151218 TCTGC-GTTGCATACTCTGCTCCAGTTGCTGCTGCGAGTGCAGTGTTCCTCGTCTATCCT 151276 | ||| |||||||| || ||||| ||||| || |||| ||| || ||| | |||||||| Sbjct 1161 T-TGCTGTTGCATATTCAGCTCCTGTTGCAGCGGCGACTGCTGTTTTCTTGATCTATCCT 1219 Query 151277 TTCGGTCAAGGTTCTTTCTCTGATGCAATGCCCCTGGGTATTTCTGGCACATTCAACTAC 151336 | ||||| || || || |||| ||||| || || |||||||| || ||||| | Sbjct 1220 ATTGGTCAGGGAAGCTTTTCAGATGGTATGCCTCTAGGAATTTCTGGTACTTTCAATTTT 1279 Query 151337 ATGCTTGTCTTCCAAGCAGAGCACAACATTCTGATGCA 151374 ||| |||| || || || ||||| || ||||| ||||| Sbjct 1280 ATGATTGTATTTCAGGCTGAGCATAATATTCTTATGCA 1317 >seq37735 Length=758 Score = 181 bits (200), Expect = 1e-40 Identities = 260/361 (72%), Gaps = 4/361 (1%) Strand=Plus/Minus Query 152452 GGCGGTTGGCTTACTGGGACTACTTTCGCGACGAGTTGGTATACTCACGGGTTGGCAAGT 152511 || |||||| | || || || || || | || ||||||||||| || ||||||||| Sbjct 360 GGGGGTTGGTTCACAGGTACAACCTTTGTAACTTCATGGTATACTCATGGATTGGCAAGT 301 Query 152512 TCCTATCTGGAGGGCGCAAACTTTCTTACTGCGGCAGTTTCTACTCCAGCAGAT-GCTAT 152570 || ||| |||| || ||||| | || || ||||| || ||||| || || ||| | Sbjct 300 TCTTATTTGGAAGGATGCAACTTCTTAACCGCAGCAGTCTCCACTCCTGCTAATAGCT-T 242 Query 152571 GGGTCATTCTCTTCTGCTTCTCTGGGGTCCTGAGGCTCAAGGGGATTTCGTCAGATGGAT 152630 | || ||| | || | || ||||||||||| || || || ||||| | | ||| Sbjct 241 AGCACACTCTTTGTTGTTACTGTGGGGTCCTGAAGCACAGGGAGATTTTACCCGTTGGTG 182 Query 152631 TCAGCTCGGAGGACTCTGGGCTTTTGTGGCGCTCCACGGGGCTTTCGCTCTAATCGGTTT 152690 ||| | || || || ||| ||||||| || |||||||| ||||||| |||| ||||| Sbjct 181 TCAATTAGGTGGTCTGTGGACTTTTGTTGCTCTCCACGGTGCTTTCGGATTAATAGGTTT 122 Query 152691 CATGCTTCGCCAGTTTGAACTGGCACG-TCTCATCGGTATCCGTCCCTACAATGCTATTG 152749 |||| | || || |||||||| || || ||| || | | || || || ||||| |||| Sbjct 121 CATGTTACGTCAATTTGAACTTGCTCGATCTGTTCAAT-TGCGGCCTTATAATGCAATTG 63 Query 152750 CGTTCTCTGGTCCTATCGCTGTTTTTGTTAGCGTCTTTCTCATCTACCCTCTGGGTCAAT 152809 | ||||| ||||| || |||||||||||| || || || || || || |||||||| | Sbjct 62 CATTCTCAGGTCCAATTGCTGTTTTTGTTTCTGTATTCCTTATTTATCCACTGGGTCAGT 3 Query 152810 C 152810 | Sbjct 2 C 2 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 549228671123480