Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20psidii_20[genbank_20GCA_5F001443065.1_202015-11-13] 57,309 sequences; 129,776,072 total letters Query= NC_023584.1 Length=170438 Score E Sequences producing significant alignments: (Bits) Value seq15031 241 1e-58 seq37735 185 9e-42 >seq15031 Length=1318 Score = 241 bits (266), Expect = 1e-58 Identities = 291/396 (73%), Gaps = 0/396 (0%) Strand=Plus/Plus Query 157192 CGCGAACCAGTTGCTGGTTCTCTCATGTATGGCAACAACATCATCTCTGGTGCAGTTGTT 157251 || || || ||| |||| ||||| | ||||| ||||| || || |||||||| || || Sbjct 923 CGTGAGCCTGTTTCTGGATCTCTACTTTATGGAAACAATATTATTTCTGGTGCCATTATT 982 Query 157252 CCTTCTTCAAACGCAATCGGTCTTCACTTCTACCCCATCTGGGAAGCAGCATCACTTGAT 157311 ||| |||| || || ||| | || || || || || |||||||| ||||| ||||| Sbjct 983 CCTACTTCTGCGGCTATAGGTTTGCATTTTTATCCTATATGGGAAGCGGCATCCGTTGAT 1042 Query 157312 GAGTGGCTTTACAACGGTGGTCCTTTCCAACTGGTAGTCTTTCACTTCCTGATCGGCATC 157371 || ||| | ||||| || ||||||| |||| | || | |||||| | | || | Sbjct 1043 GAATGGTTATACAATGGCGGTCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGTA 1102 Query 157372 TATGCCTATATGGGACGTGAGTGGGAACTTTCTTACCGTTTAGGTATGCGCCCCTGGATC 157431 | ||||||||| ||||||||||||||| || ||| | |||||||| || ||||| Sbjct 1103 GCTTGCTATATGGGTCGTGAGTGGGAACTTAGTTTTCGTCTGGGTATGCGTCCTTGGATT 1162 Query 157432 TGTGTTGCCTACTCGGCACCAGTCGCTGCTGCGAGTGCAGTATTCCTCGTCTATCCTTTC 157491 |||||| || || || || || || || |||| ||| || ||| | |||||||| | Sbjct 1163 GCTGTTGCATATTCAGCTCCTGTTGCAGCGGCGACTGCTGTTTTCTTGATCTATCCTATT 1222 Query 157492 GGTCAAGGTTCTTTCTCCGATGCTATGCCTCTTGGTATCTCTGGTACTTTTAACTATATG 157551 ||||| || || || |||| ||||||||| || || ||||||||||| || | |||| Sbjct 1223 GGTCAGGGAAGCTTTTCAGATGGTATGCCTCTAGGAATTTCTGGTACTTTCAATTTTATG 1282 Query 157552 CTCGTCTTCCAGGCAGAGCACAATATTCTTATGCAT 157587 | || || ||||| ||||| ||||||||||||||| Sbjct 1283 ATTGTATTTCAGGCTGAGCATAATATTCTTATGCAT 1318 >seq37735 Length=758 Score = 185 bits (204), Expect = 9e-42 Identities = 263/362 (73%), Gaps = 6/362 (2%) Strand=Plus/Minus Query 158868 GGCGGTTGGCTTACTGGCACGACTTTCGCTACGAGCTGGTATACACATGGACTCGCTACT 158927 || |||||| | || || || || || | || |||||||| |||||| | || | | Sbjct 360 GGGGGTTGGTTCACAGGTACAACCTTTGTAACTTCATGGTATACTCATGGATTGGCAAGT 301 Query 158928 TCCTATCTTGAGGG-TGCAAACTTTCTTACAGCAGCAGTTTCGACTCCAGCTGAT-GCTA 158985 || ||| | || || ||||| ||| | || |||||||| || ||||| ||| || ||| Sbjct 300 TCTTATTTGGAAGGATGCAA-CTTCTTAACCGCAGCAGTCTCCACTCCTGCTAATAGCT- 243 Query 158986 TGGGTCATTCTCTTCTGCTTCTCTGGGGTCCTGAGGCTCAAGGGGATTTCGTCAGGTGGG 159045 | | || ||| | || | || ||||||||||| || || || ||||| | | ||| Sbjct 242 TAGCACACTCTTTGTTGTTACTGTGGGGTCCTGAAGCACAGGGAGATTTTACCCGTTGGT 183 Query 159046 TCCAACTTGGGGGACTCTGGAATTTTGTGGCGCTCCACGGTGCCTTTGCCCTAATTGGTT 159105 ||| | || || || |||| |||||| || ||||||||||| || | |||| |||| Sbjct 182 GTCAATTAGGTGGTCTGTGGACTTTTGTTGCTCTCCACGGTGCTTTCGGATTAATAGGTT 123 Query 159106 TCATGCTTCGCCAGTTTGAACTGGCACG-TCTCATCGGTATCCGTCCCTACAATGCTATT 159164 ||||| | || || |||||||| || || ||| || | | || || || ||||| ||| Sbjct 122 TCATGTTACGTCAATTTGAACTTGCTCGATCTGTTCAAT-TGCGGCCTTATAATGCAATT 64 Query 159165 GCGTTCTCTGGTCCTATTGCTGTTTTTGTCAGCGTCTTCCTTATCTACCCACTTGGTCAG 159224 || ||||| ||||| |||||||||||||| || |||||||| || ||||| |||||| Sbjct 63 GCATTCTCAGGTCCAATTGCTGTTTTTGTTTCTGTATTCCTTATTTATCCACTGGGTCAG 4 Query 159225 TC 159226 || Sbjct 3 TC 2 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 544882986440720