Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20psidii_20[genbank_20GCA_5F001443065.1_202015-11-13] 57,309 sequences; 129,776,072 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq7699 120 2e-21 seq6376 109 4e-18 >seq7699 Length=4151 Score = 120 bits (132), Expect = 2e-21 Identities = 265/400 (66%), Gaps = 12/400 (3%) Strand=Plus/Minus Query 282190 ATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAG 282249 ||||||||| |||||||| ||||| | ||| | || | || || | || ||||| Sbjct 720 ATTATCAAAGTCTTCACCACCCAAGTGAGTGTCACCGGCAGTTGCCTTAACGGTGAAAAC 661 Query 282250 TCCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAG 282309 ||| | ||| || | || | |||||| ||| ||||| |||| |||||||| || Sbjct 660 TCCCCCGGCAATGGAAAGGAGGGAGACATCAAAGGTCCCACCCCCCAAGTCAAAAATGAG 601 Query 282310 TACATTCATTTCTTTGTCTTGGTTTTTATCA------------AGACCATACGCAAAAGC 282357 || | |||| || | | ||||| ||| ||||| || || | || Sbjct 600 GACGGTTCTTTCCTTCTTATCCTTTTTGTCACTCGCTTCACCAAGACCGTAAGCGATGGC 541 Query 282358 AGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATC 282417 ||| ||||||||||| || || || | | ||||| |||||||||||| || || || Sbjct 540 AGCGGCAGTTGGTTCGTTGATGATACGAAGAACATCAAGACCAGCAATAGCACCGGCGTC 481 Query 282418 TTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGT 282477 |||||| | | || ||| || || |||||||| || || || || ||||| || | | | Sbjct 480 TTTAGTTGATAATCGTTGGGAGTCATTAAAATAAGCTGGTACGGTGATAACCGCTTTTTT 421 Query 282478 TACTTCTTTTCCAATATAAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGA 282537 || ||||| || | | || || |||| ||||| ||| || | ||| | || Sbjct 420 CACCTCTTTCCCGAGTTTGGCTTCAGCGGTTTCTTTCAGCTTAGCCAAGACCATAGCCGA 361 Query 282538 AATTTGTTCTGGAGAATATTGCTTGGATTCATTTTGATAT 282577 ||||| || || ||| | || | |||||| ||||| Sbjct 360 AATTTCTTGAGGGGAAAAAGTTTTCGTTTCATTCAGATAT 321 >seq6376 Length=4460 Score = 109 bits (120), Expect = 4e-18 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 282670 ACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTT 282729 |||||| | || || || ||||| | ||| ||| ||| || | || |||| | || Sbjct 1292 ACCAATGAGACGCTTGGCGTCAAAGACAGTGTTGTGTGGGTTCATAGCCACTTGGTTCTT 1233 Query 282730 GGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCG 282789 ||| ||||| ||||||| ||| | || || || | |||||| || ||||| ||||| Sbjct 1232 GGCAGCATCACCAATCAACCTTTCAGAGTCAGTGAAGGCAACATAGGAAGGAGTAGTGCG 1173 Query 282790 ATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACT 282849 || ||||| || || ||||| ||||||||| |||||||||||||||| ||||| Sbjct 1172 GTTTCCTTGGTCGTTGGCAATGATTTCAACTCGGTCATTTTGCCATACACCAACACAGGA 1113 Query 282850 AAAAGTTGTTCCTAAATCAATACCAATAGC 282879 | || || || | ||| ||||| | ||| Sbjct 1112 GTATGTGGTGCCGAGATCGATACCGACAGC 1083 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3737816770287834