Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20psidii_20[genbank_20GCA_5F001443065.1_202015-11-13] 57,309 sequences; 129,776,072 total letters Query= NC_025456.1 Length=46547 Score E Sequences producing significant alignments: (Bits) Value seq15031 192 2e-44 >seq15031 Length=1318 Score = 192 bits (212), Expect = 2e-44 Identities = 275/379 (73%), Gaps = 10/379 (3%) Strand=Plus/Plus Query 19667 CTTCTTTATGGAAACAACATCATATCGGGAGCCGTCGTTCCGAG--CAGCAATGCCATCG 19724 || |||||||||||||| || || || || ||| | |||| | | || || || | Sbjct 944 CTACTTTATGGAAACAATATTATTTCTGGTGCCATTATTCCTACTTCTGCG--GCTATAG 1001 Query 19725 GACTACACTTCTACCCAATTTGGGAAGCTAGTTCACTTGATGAATGGCTCTACAACGGGG 19784 | | || || || || || |||||||| || ||||||||||| | ||||| || | Sbjct 1002 GTTTGCATTTTTATCCTATATGGGAAGCGGCATCCGTTGATGAATGGTTATACAATGGCG 1061 Query 19785 GACCGTTCCAACTTGTGGTCTTCCACTTCCTCATTG--GCATCTATGCTTACATGGGACG 19842 | || | |||| | || | |||||| | ||| | | || ||| || ||||| || Sbjct 1062 GTCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGTAGCT-TGC-TATATGGGTCG 1119 Query 19843 AGAGTGGGAACTTAGCTATCGACTAGGAATGAGGCCTTGGATTTGTGTTGCCTACTCTGC 19902 |||||||||||||| | ||| || || ||| | ||||||||| |||||| || || || Sbjct 1120 TGAGTGGGAACTTAGTTTTCGTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGC 1179 Query 19903 TCCGGTTGCAGCCGCCTCTGCGGTCTTTCTCG-TCTACCCGTTTGGTCAGGGTAGCTTCT 19961 ||| |||||||| || |||| || ||||| | |||| || |||||||||| ||||| | Sbjct 1180 TCCTGTTGCAGCGGCGACTGCTGT-TTTCTTGATCTATCCTATTGGTCAGGGAAGCTTTT 1238 Query 19962 CCGATGCTATGCCTTTGGGTATCTCGGGTACGTTCAACTACATGTTGGTATTCCAAGCCG 20021 | |||| ||||||| | || || || ||||| ||||| | ||| | ||||| || || | Sbjct 1239 CAGATGGTATGCCTCTAGGAATTTCTGGTACTTTCAATTTTATGATTGTATTTCAGGCTG 1298 Query 20022 AACATAACATTCTCATGCA 20040 | ||||| ||||| ||||| Sbjct 1299 AGCATAATATTCTTATGCA 1317 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 148727515397322