Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20psidii_20[genbank_20GCA_5F001443065.1_202015-11-13] 57,309 sequences; 129,776,072 total letters Query= NC_025461.1 Length=45871 Score E Sequences producing significant alignments: (Bits) Value seq15031 163 8e-36 >seq15031 Length=1318 Score = 163 bits (180), Expect = 8e-36 Identities = 279/399 (70%), Gaps = 8/399 (2%) Strand=Plus/Plus Query 28774 CGCGAACCTGTCGCTGGAAGTCTTCTCTATGGAAACAACATCATATCGGGAGCCGTCGTA 28833 || || ||||| ||||| ||| || ||||||||||| || || || || ||| | | Sbjct 923 CGTGAGCCTGTTTCTGGATCTCTACTTTATGGAAACAATATTATTTCTGGTGCCATTATT 982 Query 28834 CCGAG--CAGCAATGCCATCGGACTACACTTCTACCCAATTTGGGAAGCTAATTCACTTG 28891 || | | || || || || | || || || || || |||||||| || ||| Sbjct 983 CCTACTTCTGCG--GCTATAGGTTTGCATTTTTATCCTATATGGGAAGCGGCATCCGTTG 1040 Query 28892 ATGAATGGCTCTACAACGGGGGACCGTTCCAACTTGTGGTCTTCCACTTCCTCATTGGCG 28951 |||||||| | ||||| || || || | |||| | || | |||||| | |||| | Sbjct 1041 ATGAATGGTTATACAATGGCGGTCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTG 1100 Query 28952 T--CTATGCTTACATGGGACGCGAGTGGGAACTTAGCTATCGACTAGGAATGAGGCCGTG 29009 | || ||| || ||||| || |||||||||||||| | ||| || || ||| | || || Sbjct 1101 TAGCT-TGC-TATATGGGTCGTGAGTGGGAACTTAGTTTTCGTCTGGGTATGCGTCCTTG 1158 Query 29010 GATTTGTGTCGCATACTCAGCTCCCGTCGCAGCGGCATCTGCGGTTTTCCTCGTCTACCC 29069 |||| ||| ||||| |||||||| || |||||||| |||| |||||| | |||| || Sbjct 1159 GATTGCTGTTGCATATTCAGCTCCTGTTGCAGCGGCGACTGCTGTTTTCTTGATCTATCC 1218 Query 29070 ATTCGGTCAAGGTTCTTTTAGCGACGCGATGCCTTTGGGTATTTCAGGCACCTTCAACTA 29129 | ||||| || ||| || | |||||| | || ||||| || || ||||| | Sbjct 1219 TATTGGTCAGGGAAGCTTTTCAGATGGTATGCCTCTAGGAATTTCTGGTACTTTCAATTT 1278 Query 29130 CATGCTGGTGTTCCAAGCCGAACATAACATTCTCATGCA 29168 ||| | || || || || || ||||| ||||| ||||| Sbjct 1279 TATGATTGTATTTCAGGCTGAGCATAATATTCTTATGCA 1317 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146565787550914