Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20psidii_20[genbank_20GCA_5F001443065.1_202015-11-13] 57,309 sequences; 129,776,072 total letters Query= NC_025464.1 Length=44147 Score E Sequences producing significant alignments: (Bits) Value seq15031 208 2e-49 >seq15031 Length=1318 Score = 208 bits (230), Expect = 2e-49 Identities = 289/399 (72%), Gaps = 8/399 (2%) Strand=Plus/Plus Query 18865 CGCGAGCCTGTTGCAGGCAGTCTTCTTTATGGAAACAACATCATATCGGGAGCCGTCGTT 18924 || ||||||||| | || ||| |||||||||||||| || || || || ||| | || Sbjct 923 CGTGAGCCTGTTTCTGGATCTCTACTTTATGGAAACAATATTATTTCTGGTGCCATTATT 982 Query 18925 CCGAG--CAGCAATGCCATCGGACTACACTTCTACCCAATTTGGGAAGCTAATTCACTTG 18982 || | | || || || || | || || || || || |||||||| || ||| Sbjct 983 CCTACTTCTGCG--GCTATAGGTTTGCATTTTTATCCTATATGGGAAGCGGCATCCGTTG 1040 Query 18983 ATGAATGGCTCTACAACGGGGGACCGTTCCAACTTGTGGTCTTCCACTTCCTCATTGGCG 19042 |||||||| | ||||| || || || | |||| | || | |||||| | |||| | Sbjct 1041 ATGAATGGTTATACAATGGCGGTCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTG 1100 Query 19043 T--CTATGCTTACATGGGACGCGAGTGGGAACTTAGCTATCGACTAGGGATGCGCCCTTG 19100 | || ||| || ||||| || |||||||||||||| | ||| || || ||||| ||||| Sbjct 1101 TAGCT-TGC-TATATGGGTCGTGAGTGGGAACTTAGTTTTCGTCTGGGTATGCGTCCTTG 1158 Query 19101 GATTTGTGTTGCCTACTCAGCTCCTGTTGCCGCAGCCTCTGCGGTCTTCCTTGTCTATCC 19160 |||| |||||| || |||||||||||||| || || |||| || ||| | ||||||| Sbjct 1159 GATTGCTGTTGCATATTCAGCTCCTGTTGCAGCGGCGACTGCTGTTTTCTTGATCTATCC 1218 Query 19161 ATTTGGTCAAGGTTCCTTTAGCGACGCTATGCCTTTGGGTATTAGTGGTACGTTCAACTA 19220 ||||||| || |||| || | ||||||| | || ||| |||||| ||||| | Sbjct 1219 TATTGGTCAGGGAAGCTTTTCAGATGGTATGCCTCTAGGAATTTCTGGTACTTTCAATTT 1278 Query 19221 CATGCTTGTATTCCAGGCTGAACATAACATCCTCATGCA 19259 ||| ||||||| |||||||| ||||| || || ||||| Sbjct 1279 TATGATTGTATTTCAGGCTGAGCATAATATTCTTATGCA 1317 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 141052741978122