Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20psidii_20[genbank_20GCA_5F001443065.1_202015-11-13] 57,309 sequences; 129,776,072 total letters Query= NC_026923.1 Length=179110 Score E Sequences producing significant alignments: (Bits) Value seq15031 217 2e-51 seq37735 214 2e-50 >seq15031 Length=1318 Score = 217 bits (240), Expect = 2e-51 Identities = 285/395 (72%), Gaps = 0/395 (0%) Strand=Plus/Plus Query 157817 CGCGAACCAGTTGCTGGTTCACTCATGTATGGTAACAACATCATCTCTGGTGCAGTTGTT 157876 || || || ||| |||| || || | ||||| ||||| || || |||||||| || || Sbjct 923 CGTGAGCCTGTTTCTGGATCTCTACTTTATGGAAACAATATTATTTCTGGTGCCATTATT 982 Query 157877 CCTAGTTCAAACGCAATCGGTCTCCACTTCTACCCCATCTGGGAAGCAGCATCTCTTGAC 157936 |||| ||| || || ||| | || || || || || |||||||| ||||| |||| Sbjct 983 CCTACTTCTGCGGCTATAGGTTTGCATTTTTATCCTATATGGGAAGCGGCATCCGTTGAT 1042 Query 157937 GAGTGGCTGTATAACGGTGGTCCTTTCCAACTTGTAGTATTCCACTTCCTGATCGGCATC 157996 || ||| | || || || ||||||| |||| | || | |||||| | | || | Sbjct 1043 GAATGGTTATACAATGGCGGTCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGTA 1102 Query 157997 TATGCCTATATGGGACGTGAGTGGGAACTCTCTTACCGTTTAGGTATGCGCCCATGGATC 158056 | ||||||||| |||||||||||||| || ||| | |||||||| || ||||| Sbjct 1103 GCTTGCTATATGGGTCGTGAGTGGGAACTTAGTTTTCGTCTGGGTATGCGTCCTTGGATT 1162 Query 158057 TGTGTAGCATATTCTGCTCCAGTCGCTGCAGCGAGTGCAGTATTCCTAGTCTATCCTTTC 158116 ||| |||||||| ||||| || || || |||| ||| || ||| | |||||||| | Sbjct 1163 GCTGTTGCATATTCAGCTCCTGTTGCAGCGGCGACTGCTGTTTTCTTGATCTATCCTATT 1222 Query 158117 GGTCAAGGTTCTTTCTCCGATGCTATGCCTCTTGGTATCTCTGGTACTTTTAACTACATG 158176 ||||| || || || |||| ||||||||| || || ||||||||||| || | ||| Sbjct 1223 GGTCAGGGAAGCTTTTCAGATGGTATGCCTCTAGGAATTTCTGGTACTTTCAATTTTATG 1282 Query 158177 CTTGTATTCCAAGCAGAACACAACATCCTTATGCA 158211 ||||||| || || || || || || |||||||| Sbjct 1283 ATTGTATTTCAGGCTGAGCATAATATTCTTATGCA 1317 >seq37735 Length=758 Score = 214 bits (236), Expect = 2e-50 Identities = 279/378 (74%), Gaps = 6/378 (2%) Strand=Plus/Minus Query 159457 GCTTATATGGCCATTGGCGGTTGGCTTACTGGCACGACTTTTATCACGAGTTGGTACACC 159516 || ||| | ||| | || |||||| | || || || || ||| | || ||||| || Sbjct 375 GCCTATTTCGCCTTGGGGGGTTGGTTCACAGGTACAACCTTTGTAACTTCATGGTATACT 316 Query 159517 CACGGTCTTGCTAGTTCCTACCTTGAAGG-TGCTAATTTTCTCACGGCAGCTGTCTCAAC 159575 || || | || ||||| || | ||||| ||| | || | | || ||||| ||||| || Sbjct 315 CATGGATTGGCAAGTTCTTATTTGGAAGGATGCAACTTCT-TAACCGCAGCAGTCTCCAC 257 Query 159576 GCCTGCTGAT-GCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCTCAAGGCG 159634 |||||| || ||| | | || ||| | | |||| ||||||||||| | || || | Sbjct 256 TCCTGCTAATAGCT-TAGCACACTCTTTGTTGTTACTGTGGGGTCCTGAAGCACAGGGAG 198 Query 159635 ACTTCCAACGCTGGTGCCAACTTGGAGGGATTTGGTCCTTTGTTGCTCTCCACGGTGCAT 159694 | || || ||||| ||| | || || | ||| | |||||||||||||||||||| | Sbjct 197 ATTTTACCCGTTGGTGTCAATTAGGTGGTCTGTGGACTTTTGTTGCTCTCCACGGTGCTT 138 Query 159695 TCGCTCTCATAGGTTTTATGCTACGGCAATTTGAAATTGCTCG-TCTAGTTGGTATCCGT 159753 ||| | |||||||| ||| |||| ||||||||| ||||||| ||| ||| | || Sbjct 137 TCGGATTAATAGGTTTCATGTTACGTCAATTTGAACTTGCTCGATCT-GTTCAATTGCGG 79 Query 159754 CCTTACAATGCTATTGCGTTCTCTGGTCCTATTGCTGTTTTTGTCAGCGTATTCCTTATC 159813 ||||| ||||| ||||| ||||| ||||| |||||||||||||| ||||||||||| Sbjct 78 CCTTATAATGCAATTGCATTCTCAGGTCCAATTGCTGTTTTTGTTTCTGTATTCCTTATT 19 Query 159814 TATCCACTGGGTCAGTCT 159831 |||||||||||||||||| Sbjct 18 TATCCACTGGGTCAGTCT 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 572613507094800