Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20psidii_20[genbank_20GCA_5F001443065.1_202015-11-13] 57,309 sequences; 129,776,072 total letters Query= NC_026927.1 Length=228143 Score E Sequences producing significant alignments: (Bits) Value seq15031 194 2e-44 seq37735 156 6e-33 >seq15031 Length=1318 Score = 194 bits (214), Expect = 2e-44 Identities = 280/395 (71%), Gaps = 0/395 (0%) Strand=Plus/Plus Query 174609 CGTGAACCAGTAGCTGGTTCACTCATGTATGGAAACAACATCATCTCTGGTGCAGTTGTT 174668 ||||| || || |||| || || | ||||||||||| || || |||||||| || || Sbjct 923 CGTGAGCCTGTTTCTGGATCTCTACTTTATGGAAACAATATTATTTCTGGTGCCATTATT 982 Query 174669 CCTAGTTCAAACGCAATCGGTCTACACTTCTACCCAATCTGGGAAGCAGCCACACTCGAC 174728 |||| ||| || || ||| | || || || || || |||||||| || | | || Sbjct 983 CCTACTTCTGCGGCTATAGGTTTGCATTTTTATCCTATATGGGAAGCGGCATCCGTTGAT 1042 Query 174729 GAATGGCTCTACAACGGTGGTCCTTTCCAACTAGTTGTCTTCCACTTCCTTATTGGTATC 174788 |||||| | ||||| || ||||||| ||||| |||| | |||||| | ||||| | Sbjct 1043 GAATGGTTATACAATGGCGGTCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGTA 1102 Query 174789 TACGCCTATATGGGACGTGAGTGGGAACTCTCTTATCGTTTAGGTATGAGACCTTGGATC 174848 ||||||||| |||||||||||||| || |||| | |||||| | |||||||| Sbjct 1103 GCTTGCTATATGGGTCGTGAGTGGGAACTTAGTTTTCGTCTGGGTATGCGTCCTTGGATT 1162 Query 174849 TGTGTAGCATACTCTGCACCAGTTGCAGCAGCTTCAGCAGTATTCCTAGTCTATCCTTTC 174908 ||| ||||| || || || |||||||| || | || || ||| | |||||||| | Sbjct 1163 GCTGTTGCATATTCAGCTCCTGTTGCAGCGGCGACTGCTGTTTTCTTGATCTATCCTATT 1222 Query 174909 GGTCAAGGTTCATTCTCAGACGCGATGCCCTTGGGTATCTCTGGAACATTCAACTACATG 174968 ||||| || || ||||| | ||||| | || || ||||| || ||||| | ||| Sbjct 1223 GGTCAGGGAAGCTTTTCAGATGGTATGCCTCTAGGAATTTCTGGTACTTTCAATTTTATG 1282 Query 174969 TTGGTCTTCCAAGCAGAACATAACATCTTGATGCA 175003 | || || || || || ||||| || | ||||| Sbjct 1283 ATTGTATTTCAGGCTGAGCATAATATTCTTATGCA 1317 >seq37735 Length=758 Score = 156 bits (172), Expect = 6e-33 Identities = 264/377 (70%), Gaps = 4/377 (1%) Strand=Plus/Minus Query 175929 GCTTATCTTGCCATTGGCGGCTGGCTTACTGGCACAACTTTTGTCACGAGTTGGTACACC 175988 || ||| | ||| | || || ||| | || || ||||| ||||| || ||||| || Sbjct 375 GCCTATTTCGCCTTGGGGGGTTGGTTCACAGGTACAACCTTTGTAACTTCATGGTATACT 316 Query 175989 CATGGTCTTGCTTCTTCCTATCTTGAGGG-TGCTAACTTTCTCACAGCGGCTGTCTCGAC 176047 ||||| | || ||| ||| | || || ||| ||||| | || || || ||||| || Sbjct 315 CATGGATTGGCAAGTTCTTATTTGGAAGGATGC-AACTTCTTAACCGCAGCAGTCTCCAC 257 Query 176048 TCCTGCTGAT-GCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAATCTCAGGGCG 176106 ||||||| || ||| | | || ||| | | |||| |||||||||||| | ||||| | Sbjct 256 TCCTGCTAATAGCT-TAGCACACTCTTTGTTGTTACTGTGGGGTCCTGAAGCACAGGGAG 198 Query 176107 ACTTCCAGCGGTGGCTCCAACTTGGAGGGCTTTGGTCCTTTGTTGCTCTCCACGGTGCCT 176166 | || || ||| ||| | || || || ||| | |||||||||||||||||||| | Sbjct 197 ATTTTACCCGTTGGTGTCAATTAGGTGGTCTGTGGACTTTTGTTGCTCTCCACGGTGCTT 138 Query 176167 TCGCTCTGATTGGATTCATGCTTCGTCAGTTTGAACTGGCAAGACTCATTGGTATCCGTC 176226 ||| | || || |||||| | ||||| |||||||| || || || | || | Sbjct 137 TCGGATTAATAGGTTTCATGTTACGTCAATTTGAACTTGCTCGATCTGTTCAATTGCGGC 78 Query 176227 CCTACAACGCTATTGCATTCAGTGGTCCTATCGCTGTATTTGTCAGTGTGTTTCTTCTAT 176286 | || || || ||||||||| ||||| || ||||| ||||| ||| || ||| | | Sbjct 77 CTTATAATGCAATTGCATTCTCAGGTCCAATTGCTGTTTTTGTTTCTGTATTCCTTATTT 18 Query 176287 ACCCACTAGGTCAATCT 176303 | ||||| ||||| ||| Sbjct 17 ATCCACTGGGTCAGTCT 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 729406705806920