Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20psidii_20[genbank_20GCA_5F001443065.1_202015-11-13] 57,309 sequences; 129,776,072 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq8935 109 8e-19 >seq8935 Length=3822 Score = 109 bits (120), Expect = 8e-19 Identities = 151/208 (73%), Gaps = 4/208 (2%) Strand=Plus/Plus Query 70307 CATAGTTGAATAAATCTTCCATTACATCACTAAATAGtttttttGTTTCCTTGTGTAAAT 70366 ||||| || | | |||||| || || | |||||||| || || ||||||||||| | | Sbjct 1172 CATAGGTGTAAAGATCTTCAATGACTTGGCTAAATAGCTTCTTAGTTTCCTTGTGCAGGT 1231 Query 70367 TTGATATGGCTATTCTGGCTGCTAGAATAGCATAGTCAGGATGTTGTGTAGTACAAGTAG 70426 | || ||||| || || ||||||| |||||| || |||||| | || || | || Sbjct 1232 TGCTGATCGCTATCCTAGCAGCTAGAACAGCATAATCGGGATGTCGAGTGGTCATATAAG 1291 Query 70427 CTGCTATTTCCGCAGCTAACGTATCTAATTCTATAGTTGTAACTCCGTTATATA-GCCCT 70485 | ||| | |||||||| || | || | || | ||||||||| || ||| | | ||| | Sbjct 1292 CGGCTGTCTCCGCAGCCAAATTGTCAAGCTCAACAGTTGTAACGCCATTAAAAACGCCAT 1351 Query 70486 TGAATAACTTTCATGG--CTATTTTGAT 70511 || ||||||||| ||| |||| ||||| Sbjct 1352 TG-ATAACTTTCTTGGTTCTATATTGAT 1378 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686416724294760