Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20psidii_20[genbank_20GCA_5F001443065.1_202015-11-13] 57,309 sequences; 129,776,072 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq12608 116 5e-21 >seq12608 Length=2986 Score = 116 bits (128), Expect = 5e-21 Identities = 249/367 (68%), Gaps = 4/367 (1%) Strand=Plus/Plus Query 110720 GTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATT 110779 |||||||| |||||||||||||| |||| ||||| ||| || || |||||||| Sbjct 1954 GTGTATGGCTCAAAGCATTCATTGAAGCCCAGAATTTGGCTGGTTGATGCAGTTGGCATC 2013 Query 110780 GGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTCCTTGAGAACATCC 110839 || || ||||||||| ||| || | || | | ||||| ||| || || |||| Sbjct 2014 GGCGCAATCAAAAGAGAGTTTCGCAATCCGCTGACTTTGATTTTTTCTTTTAGGTTATCC 2073 Query 110840 CAGTCGTAGTTGAGC-TTGGTTTCACCTTCCCACATGTCAAACTGAAGCACCCCTTGGGA 110898 || || | | | | ||||| | | |||||||| ||||| ||||| | |||||| Sbjct 2074 CATTCCCACAAGTCCGTCGGTTTGA-CATCCCACATATCAAATTGAAGTATGCCTTGGCT 2132 Query 110899 CGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGC 110958 || ||||| || | || |||||||| || || | ||| || | |||| || Sbjct 2133 TGCAGGAGAGCCTTGGAAAGTTTCATAAGAGCCATTGGCAATGGCTAGTTCATTAGAGGC 2192 Query 110959 CTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATC 111018 |||||| | |||||||| | || ||||| || | | |||| | ||| |||||| Sbjct 2193 CTCCAGCGCCGCGTGATAGAGTGTCTCAAATATTTGTGAGTTCAATTTCTTCGCTTCAGG 2252 Query 111019 TGAATCAAATGCGTAGCGGCACAAAAT-AAATACATCCGCGAGACCTTGAACACCCAAAC 111077 ||||||||| | | || || | | ||| |||| || || |||||||| || | | Sbjct 2253 TGAATCAAACG-GAAGTTTCAGGATCTGAAAAGCATCGGCAAGTCCTTGAACCCCGATGC 2311 Query 111078 CAATAGG 111084 |||| || Sbjct 2312 CAATGGG 2318 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627582101426400