Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20psidii_20[genbank_20GCA_5F001443065.1_202015-11-13] 57,309 sequences; 129,776,072 total letters Query= NC_028663.1 Length=188632 Score E Sequences producing significant alignments: (Bits) Value seq15031 219 5e-52 >seq15031 Length=1318 Score = 219 bits (242), Expect = 5e-52 Identities = 279/383 (73%), Gaps = 6/383 (2%) Strand=Plus/Plus Query 176269 GGATCTCTACTCTATGGAAACAACATCATCTCAGGAGCAGTCGTCCCAAGCTCAAACGCA 176328 ||||||||||| ||||||||||| || || || || || | | || | || || Sbjct 938 GGATCTCTACTTTATGGAAACAATATTATTTCTGGTGCCATTATTCCTACTTCTGCGGCT 997 Query 176329 ATCGGACTACACTTCTACCCAATCTGGGAAGCAGCAACAGTTGACGAATGGCTCTACAAT 176388 || || | || || || || || |||||||| ||| | ||||| |||||| | |||||| Sbjct 998 ATAGGTTTGCATTTTTATCCTATATGGGAAGCGGCATCCGTTGATGAATGGTTATACAAT 1057 Query 176389 GGAGGACCATACCAACTCGTTGTATTCCACTTCCTTATCGGTATCTCAGCTTAC---ATG 176445 || || || || |||| |||| | |||||| | | ||| | ||||| | ||| Sbjct 1058 GGCGGTCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGT---AGCTTGCTATATG 1114 Query 176446 GGACGCCAATGGGAACTTAGTTACAGACTAGGCATGCGTCCTTGGATCTGTGTTGCATAC 176505 || || | ||||||||||||| | || || |||||||||||||| ||||||||| Sbjct 1115 GGTCGTGAGTGGGAACTTAGTTTTCGTCTGGGTATGCGTCCTTGGATTGCTGTTGCATAT 1174 Query 176506 TCTGCACCAGTATCTGCAGCGATGGCAGTTTTCCTCGTCTATCCATTCGGTCAAGGATCT 176565 || || || || | || |||| || |||||| | ||||||| | ||||| ||| Sbjct 1175 TCAGCTCCTGTTGCAGCGGCGACTGCTGTTTTCTTGATCTATCCTATTGGTCAGGGAAGC 1234 Query 176566 TTCTCTGATGGTATGCCTCTTGGCATTTCAGGTACATTCAACTTTATGTTTGTATTCCAA 176625 || || |||||||||||||| || ||||| ||||| ||||| |||||| ||||||| || Sbjct 1235 TTTTCAGATGGTATGCCTCTAGGAATTTCTGGTACTTTCAATTTTATGATTGTATTTCAG 1294 Query 176626 GCAGAGCACAACATTCTAATGCA 176648 || ||||| || ||||| ||||| Sbjct 1295 GCTGAGCATAATATTCTTATGCA 1317 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 603062079242880