Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20psidii_20[genbank_20GCA_5F001443065.1_202015-11-13] 57,309 sequences; 129,776,072 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq8935 102 1e-16 >seq8935 Length=3822 Score = 102 bits (112), Expect = 1e-16 Identities = 142/198 (72%), Gaps = 6/198 (3%) Strand=Plus/Plus Query 78715 CATAGTTAAATAAATCTTCCATTACATCACTAAATAGtttttttGTTTCCTTGTGTAGAT 78774 ||||| | | | |||||| || || | |||||||| || || ||||||||||| || | Sbjct 1172 CATAGGTGTAAAGATCTTCAATGACTTGGCTAAATAGCTTCTTAGTTTCCTTGTGCAGGT 1231 Query 78775 TAGATACAGCTATTCTTGCAGCTAGAATAGCATAATCAGGATGTTGTGTAG---TACAAG 78831 | | ||||| || |||||||||| ||||||||| |||||| | || | || ||| Sbjct 1232 TGCTGATCGCTATCCTAGCAGCTAGAACAGCATAATCGGGATGTCGAGTGGTCATATAAG 1291 Query 78832 TGGCTGCTATTTCTGCCGCTAAAATATCTAACTCTATAGTTGTGACCCCATTATATAGTC 78891 ||||| | || || || ||| | || | ||| | |||||| || |||||| | | | Sbjct 1292 CGGCTG---TCTCCGCAGCCAAATTGTCAAGCTCAACAGTTGTAACGCCATTAAAAACGC 1348 Query 78892 CTTGAATAACTTTCATGG 78909 | | ||||||||| ||| Sbjct 1349 CATTGATAACTTTCTTGG 1366 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694171165321760