Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20psidii_20[genbank_20GCA_5F001443065.1_202015-11-13] 57,309 sequences; 129,776,072 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq8935 96.9 5e-15 >seq8935 Length=3822 Score = 96.9 bits (106), Expect = 5e-15 Identities = 142/195 (73%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 77324 TCTTCCATTACGTCGCTAAATAGtttttttGTTTCCTTGTGTAGATTCGATACGGCTATT 77383 ||||| || || | ||||||||| || || ||||||||||| || || | ||||| Sbjct 1186 TCTTCAATGACTTGGCTAAATAGCTTCTTAGTTTCCTTGTGCAGGTTGCTGATCGCTATC 1245 Query 77384 CTAGCAGCTAGAATTGCATAGTCAGGATGTTGTGTAGTGCAGGT-GGCTGCTATTTCTGC 77442 ||||||||||||| ||||| || |||||| | || || || | || ||| | || || Sbjct 1246 CTAGCAGCTAGAACAGCATAATCGGGATGTCGAGTGGT-CATATAAGCGGCTGTCTCCGC 1304 Query 77443 CGCTAAAGTATCTAATTCTATAGTAGTAACTCCGTTATATA-GCCCTTGAATAACTTTCA 77501 || ||| | || | || | ||| ||||| || ||| | | ||| ||| ||||||||| Sbjct 1305 AGCCAAATTGTCAAGCTCAACAGTTGTAACGCCATTAAAAACGCCATTG-ATAACTTTCT 1363 Query 77502 TGG--CTATTTTGAT 77514 ||| |||| ||||| Sbjct 1364 TGGTTCTATATTGAT 1378 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712423680530880