Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20psidii_20[genbank_20GCA_5F001443065.1_202015-11-13] 57,309 sequences; 129,776,072 total letters Query= NC_031242.1 Length=174307 Score E Sequences producing significant alignments: (Bits) Value seq15031 246 3e-60 seq37735 194 2e-44 >seq15031 Length=1318 Score = 246 bits (272), Expect = 3e-60 Identities = 295/397 (74%), Gaps = 4/397 (1%) Strand=Plus/Plus Query 164069 CGCGAACCCGTCGCTGGTTCGCTCATGTATGGAAACAACATCATCTCTGGTGCTGTTATC 164128 || || || || |||| || || | ||||||||||| || || |||||||| |||| Sbjct 923 CGTGAGCCTGTTTCTGGATCTCTACTTTATGGAAACAATATTATTTCTGGTGCCATTATT 982 Query 164129 CCTTCTTCTAACGCTATCGGTCTGCACTTCTACCCCATCTGGGAAGCAGCAAGTCTGGAC 164188 ||| ||||| ||||| ||| |||| || || || || |||||||| ||| | || Sbjct 983 CCTACTTCTGCGGCTATAGGTTTGCATTTTTATCCTATATGGGAAGCGGCATCCGTTGAT 1042 Query 164189 GAATGGCTCTACAACGGTGGTCCTTTCCAACTCGTTGTGTTCCACTTCCTGATTG--GCA 164246 |||||| | ||||| || ||||||| |||| |||| | |||||| | ||| | | Sbjct 1043 GAATGGTTATACAATGGCGGTCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGTA 1102 Query 164247 TCTATGCTTACATGGGTCGTGAGTGGGAACTTTCTTACCGTCTTGGTATGCGTCCTTGGA 164306 || ||| || ||||||||||||||||||||| || ||||| |||||||||||||||| Sbjct 1103 GCT-TGC-TATATGGGTCGTGAGTGGGAACTTAGTTTTCGTCTGGGTATGCGTCCTTGGA 1160 Query 164307 TTTGCGTAGCATACTCTGCTCCTGTCGCTGCAGCGAGTGCAGTGTTCCTGGTCTATCCTT 164366 || || ||||| || |||||||| || || |||| ||| || ||| || |||||||| Sbjct 1161 TTGCTGTTGCATATTCAGCTCCTGTTGCAGCGGCGACTGCTGTTTTCTTGATCTATCCTA 1220 Query 164367 TCGGTCAAGGTTCTTTCTCTGATGCAATGCCTCTGGGCATCTCTGGAACCTTCAACTACA 164426 | ||||| || || || |||| |||||||| || || ||||| || ||||| | | Sbjct 1221 TTGGTCAGGGAAGCTTTTCAGATGGTATGCCTCTAGGAATTTCTGGTACTTTCAATTTTA 1280 Query 164427 TGTTGGTCTTCCAGGCTGAGCACAACATCCTCATGCA 164463 || | || || ||||||||||| || || || ||||| Sbjct 1281 TGATTGTATTTCAGGCTGAGCATAATATTCTTATGCA 1317 >seq37735 Length=758 Score = 194 bits (214), Expect = 2e-44 Identities = 265/362 (73%), Gaps = 6/362 (2%) Strand=Plus/Minus Query 165246 GGGGGTTGGCTTACTGGGACTACTTTCGTCACGAGTTGGTATACTCACGGACTTGCGAGT 165305 ||||||||| | || || || || || || || ||||||||||| ||| | || ||| Sbjct 360 GGGGGTTGGTTCACAGGTACAACCTTTGTAACTTCATGGTATACTCATGGATTGGCAAGT 301 Query 165306 TCCTATCTTGAGGG-TGCAAACTTTCTTACTGCGGCAGTTTCTACTCCAGCAGAC-GCTA 165363 || ||| | || || ||||| ||| | || || ||||| || ||||| || | ||| Sbjct 300 TCTTATTTGGAAGGATGCAA-CTTCTTAACCGCAGCAGTCTCCACTCCTGCTAATAGCT- 243 Query 165364 TGGGTCATTCTCTTCTGCTTCTATGGGGTCCTGAGTCTCAAGGGGACTTCATCCGCTGGT 165423 | | || ||| | || | || ||||||||||| | || || || || | ||| |||| Sbjct 242 TAGCACACTCTTTGTTGTTACTGTGGGGTCCTGAAGCACAGGGAGATTTTACCCGTTGGT 183 Query 165424 GCCAACTTGGGGGACTCTGGACTTTTGTGGCGCTCCACGGAGCCTTTGCACTTATAGGTT 165483 | ||| | || || || ||||||||||| || |||||||| || || | | | ||||||| Sbjct 182 GTCAATTAGGTGGTCTGTGGACTTTTGTTGCTCTCCACGGTGCTTTCGGATTAATAGGTT 123 Query 165484 TCATGCTTCGCCAGTTTGAACTGGCACGA-CTTATCGGTATTCGTCCTTACAATGCTATT 165542 ||||| | || || |||||||| || ||| || || | | || ||||| ||||| ||| Sbjct 122 TCATGTTACGTCAATTTGAACTTGCTCGATCTGTTCAAT-TGCGGCCTTATAATGCAATT 64 Query 165543 GCTTTCTCTGGTCCTATTGCTGTATTCGTTAGTGTTTTTCTTATGTATCCTCTGGGACAA 165602 || ||||| ||||| |||||||| || ||| ||| || ||||| ||||| ||||| || Sbjct 63 GCATTCTCAGGTCCAATTGCTGTTTTTGTTTCTGTATTCCTTATTTATCCACTGGGTCAG 4 Query 165603 TC 165604 || Sbjct 3 TC 2 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 557254917299880