Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20psidii_20[genbank_20GCA_5F001443065.1_202015-11-13] 57,309 sequences; 129,776,072 total letters Query= NC_033423.1 Length=208501 Score E Sequences producing significant alignments: (Bits) Value seq5913 98.7 1e-15 >seq5913 Length=4341 Score = 98.7 bits (108), Expect = 1e-15 Identities = 195/289 (67%), Gaps = 0/289 (0%) Strand=Plus/Minus Query 155760 ACCAACCCTTCCAATTCAGCGCCGCTGTAATTTTTAGTTTCAACGGCTATTTTATTTAAG 155819 ||||| || ||||||||| || | |||| || ||| | |||||| || || ||| Sbjct 1851 ACCAATCCAGACAATTCAGCTCCAGAGAAATTCTTGGTTAGAGCGGCTAGTTCATCTAAA 1792 Query 155820 TCTACGTCGGAAGCTAATATGTTGTGAGATTTCATTTTAGCAACGTGCACCTTTAAAATT 155879 || || || || | ||| ||| | ||||||||||| || | |||| |||| Sbjct 1791 ATAACATCTGACGCCATGATGCTGTTGGCCCTCATTTTAGCAGTATGTATATTTAGAATT 1732 Query 155880 TGAAGACGCCCCTTTTCATCGGGTAATCCAATTTCTATCTTCAATTCCAACCGCCCAGGT 155939 || | ||| |||||||| || ||||| |||||| || | | ||| || || || || Sbjct 1731 TGCAAACGACCCTTTTCGTCAGGTAAGGAAATTTCCATGTGGACTTCTAATCGACCGGGC 1672 Query 155940 CTTAATAATGCTTCGTCAATTAAGTCGGGTCTGTTGGTCATACCTATGATTAAAATGTTG 155999 | | || || || ||||| | ||| || || ||||| || || || || || || Sbjct 1671 CGAAGCAAAGCCTCATCAATCATGTCCAATCGATTAGTCATTCCAATAATCAAGATATTA 1612 Query 156000 TTTAAAGATTCTACACCGTCTATTTTAGACAATAATTGATTGACTACGG 156048 || | || ||||| || || ||||| | ||||||||| || |||| Sbjct 1611 TTCAGCTGATCAACACCATCCATCTTAGATAGTAATTGATTCACAACGG 1563 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 666597332342040