Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20sorghi_20[genbank_20GCA_5F001263375.1_202015-08-07] 15,715 sequences; 99,534,058 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq7434 118 2e-21 >seq7434 Length=10174 Score = 118 bits (130), Expect = 2e-21 Identities = 119/155 (77%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 115402 ATCGCACATCTGCTCTGAATCGGTTCGATGATTTTGGTGGAGTTGTTGCAGACTATGATG 115461 |||||||||| |||||| || || |||||||| ||| || ||||||||| | | | Sbjct 6605 ATCGCACATCGGCTCTGGATTGGCTCGATGATCTTGCTGCTGTTGTTGCACGCCAGCGCG 6664 Query 115462 AACCGCGTCGTGCTCGAGTAAACATCCATGATCCGTCGCAGCGCCTGGAAAGCACCAGGT 115521 |||||||||||| ||||||| | ||||| | |||||||||||||| || |||| Sbjct 6665 AACCGCGTCGTGTTCGAGTATATCTCCATCGTGCGTCGCAGCGCCTGTTGGGCGCCAGCC 6724 Query 115522 GTCATCGAGTCTGCCTCGTCGAGAACGACAATCTT 115556 ||||||||||| ||||| || || | || ||||| Sbjct 6725 GTCATCGAGTCCGCCTCATCTAGGATGATTATCTT 6759 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073550198813120