Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20sorghi_20[genbank_20GCA_5F001263375.1_202015-08-07] 15,715 sequences; 99,534,058 total letters Query= NC_003094.2 Length=130759 Score E Sequences producing significant alignments: (Bits) Value seq10166 93.3 4e-14 >seq10166 Length=49910 Score = 93.3 bits (102), Expect = 4e-14 Identities = 144/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 24853 TTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAGCGACAGTGTAGAAACTGTTAAG 24912 || || || |||||||| || | || ||||| || |||| | | || | ||| ||| Sbjct 22030 TTGACAGGAAAAACGATCACTTTGGAAGTCGAGTCCTCTGACACTATTGACAATGTCAAG 22089 Query 24913 GAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGACCAGCAACGTTTAATATATGCGGGC 24972 | || ||| | |||||||| | || ||||||||||| || || | ||| ||| Sbjct 22090 GCTAAGATTCAAGACAAAGAAGGAATCCCTCCAGACCAGCAACGATTGATCTTTGCTGGC 22149 Query 24973 AAACAACTGGAAGATTCCATGACTATGAACGATTACAGCATACAGAAAGAGGCCACGCTT 25032 |||||||| |||||| ||| || ||| |||| ||| ||||||||| |||| ||| Sbjct 22150 AAACAACTCGAAGATGGGCGAACTCTGGCCGACTACAACATCCAGAAAGAGTCCACTCTT 22209 Query 25033 CATTTAGTGTTACGATTGCGCGGAGG 25058 ||||| || | ||| | || || || Sbjct 22210 CATTTGGTCCTCCGACTACGAGGGGG 22235 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 418223883672800