Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20sorghi_20[genbank_20GCA_5F001263375.1_202015-08-07] 15,715 sequences; 99,534,058 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq6918 93.3 6e-14 >seq6918 Length=27162 Score = 93.3 bits (102), Expect = 6e-14 Identities = 139/193 (72%), Gaps = 6/193 (3%) Strand=Plus/Plus Query 66773 ATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATT 66832 |||| || | | || || || |||| |||||| |||||||| ||||||||||| ||||| Sbjct 6581 ATAGGTGTAAAGGTCTTCGATGACTTGACTAAAGAGTTTTTTAGTTTCTTTGTGAAGATT 6640 Query 66833 --TGATACGGCTATTCTAGCGGCTATAATGGCATAATCCGGATGTTGTGTAGTACAAGT- 66889 ||||| || || || || |||| | ||| ||||| ||||| | || || || || Sbjct 6641 ACTGATA--GCGATCCTGGCAGCTAAGACGGCGTAATCGGGATGACGAGTGGT-CATGTA 6697 Query 66890 GGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTCC 66949 || || |||| ||||||| | |||| | ||| ||||| || || || || | | ||| Sbjct 6698 CGCGGCAGTTTCCGCTGCCAAATTGTCAAGTTCAACCGTGGTGACACCGTTGAAAACTCC 6757 Query 66950 TTGGATAACCTTC 66962 | ||| || ||| Sbjct 6758 ATTGATGACTTTC 6770 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658043510180600