Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20sorghi_20[genbank_20GCA_5F001263375.1_202015-08-07] 15,715 sequences; 99,534,058 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq8339 87.8 3e-12 >seq8339 Length=4102 Score = 87.8 bits (96), Expect = 3e-12 Identities = 80/101 (79%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 125472 TTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAAC 125531 ||||| | ||||| |||||||||||||||||||| ||||| ||| |||| | || Sbjct 1770 TTTGCTTCAATCTTCTGGCTCAAGAAGCGCGGACTAATGCCTGGATTGACCTTCTCCAAT 1711 Query 125532 GAGTTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGC 125572 ||| | |||||||||||||| || |||||| |||||||| Sbjct 1710 GAGCTGATATCTCGAGACGAAGGTCTACACACCGACTTTGC 1670 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 740913628183400