Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20sorghi_20[genbank_20GCA_5F001263375.1_202015-08-07] 15,715 sequences; 99,534,058 total letters Query= NC_005068.1 Length=110907 Score E Sequences producing significant alignments: (Bits) Value seq7108 82.4 5e-11 >seq7108 Length=7890 Score = 82.4 bits (90), Expect = 5e-11 Identities = 95/128 (74%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 43910 AACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCG 43969 ||||||| ||| | ||| ||| || |||||||| || || ||| ||| | || Sbjct 5081 AACACCAGATGCAAGGTGGACTCCTTCTGAATATTGTAGTCAGCCAATGTACGGCCGTCT 5022 Query 43970 TCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCT 44029 |||| ||||||||| ||||| ||||||||||| || ||| | || | |||||| || ||| Sbjct 5021 TCCAGTTGTTTTCCGGCAAAGATCAACCGTTGTTGATCCGGTGGGATACCTTCCTTGTCT 4962 Query 44030 GAAATTTT 44037 |||||| Sbjct 4961 TGAATTTT 4954 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 354709650665820